Pairwise Alignments

Query, 391 a.a., Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) from Variovorax sp. SCN45

Subject, 217 a.a., choline ABC transporter permease from Pseudomonas simiae WCS417

 Score =  109 bits (272), Expect = 8e-29
 Identities = 63/187 (33%), Positives = 108/187 (57%), Gaps = 5/187 (2%)

Query: 167 LSLVLTSLVFCMVIGLPLGVLLASSDRAQRIMRPVLDAMQTTPA---FVYLVPVVMLFG- 222
           ++LV  +++  ++IG+PLG+L+         ++     + T P+   F  L+P    FG 
Sbjct: 23  ITLVGIAVILAILIGVPLGILMTRFPTLAGPLQASATVLLTVPSIALFGLLLPFYSKFGQ 82

Query: 223 -IGNVPGVIVTIIFALAPLVRLTNLGLRQVRPDLIEAARAYGASPWQMLVKVQLPLAMPS 281
            +G +P +    +++L P++R T L L  V P + EAAR  G +  Q L  V+LP+A+P 
Sbjct: 83  GLGPMPAITAVFLYSLLPIMRNTYLALTGVEPGIREAARGIGMTFGQRLRMVELPIAVPV 142

Query: 282 IMAGINQALMLSLSMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGLGIVLLAISLDRL 341
           I+AG+  A+++++ ++ IA+ I  GGLG ++L  I R DM +  VG + + LLAI  D L
Sbjct: 143 ILAGVRTAVVMNIGVMTIAATIGAGGLGVLILASISRSDMSMLIVGAVLVSLLAIFADLL 202

Query: 342 TQAMGKS 348
            Q + +S
Sbjct: 203 LQWLQRS 209