Pairwise Alignments

Query, 391 a.a., Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) from Variovorax sp. SCN45

Subject, 281 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  217 bits (553), Expect = 3e-61
 Identities = 117/269 (43%), Positives = 170/269 (63%), Gaps = 3/269 (1%)

Query: 75  LWDGSLPIESWINQGLGWVVEHFRPFFQTVRLPIDSTLNSVQSLLTGLPTLAMIALIGLF 134
           L +  +P+  +I   + W+ +H   +F  +   +++ ++ V   LT    LA+I LI L 
Sbjct: 2   LTEQKIPLGQYIAAFVEWLTQHGANYFDAIASTLETMIHGVTFALTWFNPLALIGLIALL 61

Query: 135 AWQFAGR--ALAIGTTVALLLVAMLGIWPEAMVTLSLVLTSLVFCMVIGLPLGVLLASSD 192
           A  F  R   L +    + LL+  LG W E M TL+ VL + + C+VIG+PLG++ A   
Sbjct: 62  A-HFIQRKWGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVVIGVPLGIVAAHKP 120

Query: 193 RAQRIMRPVLDAMQTTPAFVYLVPVVMLFGIGNVPGVIVTIIFALAPLVRLTNLGLRQVR 252
               +MRPVLD MQT P FVYL+P + LFG+G VPG+I T++FA+A  +RLT LG+R V 
Sbjct: 121 MFYTMMRPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVP 180

Query: 253 PDLIEAARAYGASPWQMLVKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVGGLGQMV 312
            +L++A +A+G S  Q+L +++LP AMPSI AGI Q +MLSLSMVVIA+++   GLG+ V
Sbjct: 181 QELMDAGKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPV 240

Query: 313 LRGIGRLDMGLATVGGLGIVLLAISLDRL 341
           +  +   D+ L    GL IVLLAI LDR+
Sbjct: 241 VNALNTADIALGFEAGLAIVLLAIMLDRI 269