Pairwise Alignments

Query, 391 a.a., Glycine betaine/L-proline transport system permease protein ProW (TC 3.A.1.12.1) from Variovorax sp. SCN45

Subject, 381 a.a., ABC transporter, membrane spanning protein (proline/glycine/betaine) from Agrobacterium fabrum C58

 Score =  106 bits (264), Expect = 1e-27
 Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 22/216 (10%)

Query: 160 WPEAMVTLSLVLTSLVFCMVIGLPLGVLLASSDRAQRIMRPVLDAMQTTPAF----VYLV 215
           W EA+  + L + SL+   V G+PLG+L    +R +  +   L+ +QT P+     + + 
Sbjct: 166 WIEAVRHVELAIGSLIAATVAGIPLGILCYKVERLRAGVLNSLNIVQTIPSIALFGLLIA 225

Query: 216 PV------------VMLFGIGNVPGVIVTIIFALAPLVRLTNLGLRQVRPDLIEAARAYG 263
           P+            + + GIG  P  +   +++L P+V  T +GL  V   + EAAR  G
Sbjct: 226 PLGWIAATVPGAARIGIAGIGMAPAFVALFLYSLLPVVSNTVVGLAGVSHAIREAARGLG 285

Query: 264 ASPWQMLVKVQLPLAMPSIMAGINQALMLSLSMVVIASMIAVGGLGQMVLRGIGRLDMGL 323
            +P Q L++V+ PLAMP I+ GI   L+ ++ +  IA++I  GG G  V +GIG+  M L
Sbjct: 286 MTPVQRLLRVEFPLAMPVILTGIRIVLVQNIGLATIAALIGGGGFGVFVFQGIGQTAMDL 345

Query: 324 ATVGGLGIVLL----AISLDRLTQAMGKSRRAGGRR 355
             +G +  VLL    AI+LD L  +   S  AGGR+
Sbjct: 346 VLLGTVPTVLLGFAAAITLDALIDSNLFS--AGGRQ 379