Pairwise Alignments
Query, 496 a.a., N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) from Variovorax sp. SCN45
Subject, 476 a.a., N-acetylmuramoyl-L-alanine amidase from Pseudomonas putida KT2440
Score = 273 bits (699), Expect = 7e-78
Identities = 176/461 (38%), Positives = 239/461 (51%), Gaps = 84/461 (18%)
Query: 32 ILAVRVWPAADYTRVTIESDARLNSQQLVVGSPPRLAVDIEGIDLNPELRELVGKIKPGD 91
+ ++R+W A D TR+ + + + +P RL +DI G L L + +
Sbjct: 27 VKSMRLWRAPDNTRLVFDLSGPVQHSVFTLSAPDRLVIDINGATLAAPLN-----VATSN 81
Query: 92 PYINGLRVGQNAPKVVRIVFDLKQAVVPQVFSLAPVAAYKHRLVLDLYPEQAVDPMEALI 151
I+ +R Q P +R+V DLK++V P+ F+LAP A Y +RLV+DLY +Q D
Sbjct: 82 TPISSVRSAQRTPTDLRVVVDLKKSVTPKSFTLAPNAQYGNRLVVDLY-DQEAD------ 134
Query: 152 AERLRDAPRTPQQGGNPAVAGIVPSTPTAPAGDPLGDLMAQQSMRPGPQTPPPPVVAGID 211
A+A P PP P
Sbjct: 135 -----------------AIAASAP--------------------------PPAP------ 145
Query: 212 RPTAPVIVAPPPPVVGTAPVRPIAPSPPPPVAAPRGGPATASRTDRIIIVALDPGHGGED 271
APV P V P +P PP P R I+VA+D GHGGED
Sbjct: 146 ---APVQTPATTPAVPVTPAQPAIKLPPVPSGK------------RDIVVAIDAGHGGED 190
Query: 272 PGAIGPNGTREKDIVLQVAHRLRERINAGSVNGSPMRAFLTRDADFFVPLGVRVQKARRV 331
PGA G G EKDIVLQ+A L+ +IN+ RA LTR D+F+PL R + AR+
Sbjct: 191 PGASGSRGQHEKDIVLQIAKELQRQINSEK----GFRAELTRTGDYFIPLRKRTEIARKK 246
Query: 332 QADLFVSIHADAFTTPAARGASVFALSQSGASSSAARWMANKENEADKVGG---VNVGGH 388
ADLF+SIHADA + AA GASVFALS GA+S ARW+A+ EN +D +GG V++
Sbjct: 247 GADLFISIHADAAPSRAAFGASVFALSDRGATSETARWLADTENRSDLIGGAGNVSLDDK 306
Query: 389 EAQVQRALLDMSTTAQINDSLKLGGAMLGEIKNIGARLHKGQVEQAGFAVLKAPDIPSVL 448
+ + LLD+S TA ++ SL +G +LG + + LHK +VEQAGF VLK+PDIPS+L
Sbjct: 307 DRMLAGVLLDLSMTATLSSSLNVGQKVLGNMGRV-TSLHKQRVEQAGFMVLKSPDIPSIL 365
Query: 449 VETAFISNPEEEANLRRVDYQESLADALMRGIQRYFAQNPP 489
VET FISN E A L +Q++LA ++ G+ +YF QNPP
Sbjct: 366 VETGFISNNNEAAKLASSSHQQALARSIRTGVHQYFQQNPP 406