Pairwise Alignments

Query, 330 a.a., Broad-specificity amino acid ABC transporter, permease protein 2 from Variovorax sp. SCN45

Subject, 618 a.a., ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  150 bits (380), Expect = 6e-41
 Identities = 99/310 (31%), Positives = 161/310 (51%), Gaps = 23/310 (7%)

Query: 9   VVYALLLLALVLAPFFGAYPVFVM-KLMCFALFAAAFNLLLGFTGLLSFGHAAFLGGSAY 67
           V +A L++ L L    G+Y + V  +++ FALFAA+ + ++G  G++SFGHAA+ G  +Y
Sbjct: 314 VAFAGLVVLLALPMVGGSYGLSVASEVLIFALFAASLHFMMGTGGMVSFGHAAYFGLGSY 373

Query: 68  VAGHAMKVWGLTPELGLIAGTLTGAFLGWVFGVLAIRRQGIYFAMITLALAQMMFFVALQ 127
            A   +K +G+     L+ G L  A    VFG   +R  G Y AM+TLA AQ+ + V  Q
Sbjct: 374 GAALMVKYFGIPMLAALVTGPLLAAAAALVFGWFCVRLAGAYLAMLTLAFAQIAYAVVFQ 433

Query: 128 -AKFTGGEDGLQGVPRGKLFGLIDLSSDLTMYYVALVIVVAAFLLIVRTIHSPFGQVLKG 186
            + FTGG++GL G+     +     ++ +  YY+ L +     L + R   +PFG  L+ 
Sbjct: 434 WSSFTGGDNGLIGI-----WPAPWAANPVAFYYLTLALCGGGILAVRRITFAPFGYTLRA 488

Query: 187 IKENEPRALSLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHWTASGQVILM 246
            +++  RA S+G ++S  +   F ++   +G+AGSL   + G      +    S   ++M
Sbjct: 489 CRDSALRADSIGINLSSHRWAGFALAGFFAGIAGSLYAFLKGSVFPDTISIATSVDGLVM 548

Query: 247 TLVGGLGTLSGPLVGSAVVVLLENKIGELGSFLARITTIDWFNTLGESVTMVTGLIFVIC 306
            L+GG+ TL+GP+VG+ V   L   I           T  W   L        G+I ++ 
Sbjct: 549 VLLGGVQTLTGPVVGALVYKTLHVTISSY--------TDQWRTAL--------GVIIIVL 592

Query: 307 VLAFRKGIMG 316
           V+AF +GI G
Sbjct: 593 VVAFPQGISG 602



 Score = 48.5 bits (114), Expect = 4e-10
 Identities = 58/258 (22%), Positives = 109/258 (42%), Gaps = 37/258 (14%)

Query: 39  LFAAAFNLLLGFTGLLSFGHAAFLGGSAYVA---------GHAMKVWGLTPELGLIAGTL 89
           L A+  +++ G + +++F H +F    AY+A         G     WG      ++    
Sbjct: 20  LVASGLSIIFGVSRIVNFAHGSFYMLGAYMAFTLVQKLSGGTVFGFWG-----AIVLAAA 74

Query: 90  TGAFLGWVFGVLAIRRQGIYFA---MITLALAQMMFFVALQAKFTGGEDGLQGVPRGKLF 146
             A +G V  ++ +RR  IY A   +  LA   ++  V        G + L G     L 
Sbjct: 75  AVALVGAVVEMVLLRR--IYQAPELLQLLATFGLVLIVQDLVLVLWGPEDLLGPRAPGLK 132

Query: 147 GLIDLSS------DLTMYYVALVIVVAAFLLIVRTIHSPFGQVLKGIKENEPRALSLGYD 200
           G ID+        D  +  +  V++   +LL  RT    +G +++   ++     +LG +
Sbjct: 133 GAIDIFGQSFPQYDFVLIILGPVVLGLLWLLFHRT---RWGTLIRAATQDREMVAALGVN 189

Query: 201 VSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHWTASGQVILMTLVGGLGTLSGPLV 260
            +      F + A L+GL G+++        + D+       VI+  ++GGLG++ G  +
Sbjct: 190 QAWLFTSVFTLGAFLAGLGGAVQLPREAVNHVMDLQIITEAFVIV--VIGGLGSVLGAFL 247

Query: 261 GSAVVVLLENKIGELGSF 278
            + +       IGEL +F
Sbjct: 248 AAVI-------IGELNAF 258