Pairwise Alignments

Query, 291 a.a., Broad-specificity amino acid ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 286 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

 Score =  187 bits (474), Expect = 3e-52
 Identities = 101/281 (35%), Positives = 156/281 (55%), Gaps = 2/281 (0%)

Query: 9   LSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLTWMAMEYFGINYWVM 68
           +SQ L  L  G    +L+ G ++IFGL+ V N AHGALFMLGA L   A++  G  +W  
Sbjct: 5   VSQSLNALALGGLLFMLASGFSLIFGLMRVANLAHGALFMLGAYLGLAAVKA-GFGFWAA 63

Query: 69  LIAAPIVIGIFGVLIERLLLRWIYKLDHLYGLLLTLGLTLLIEGVFRSVYGVSGLPYDAP 128
              A + +G+ G +IER LLR +     L  +LLTLGL  +I       +G   +    P
Sbjct: 64  AATAAVAVGLLGGIIERTLLRRLAGRT-LPQVLLTLGLAFIIADACLMTWGGDPMRLPPP 122

Query: 129 DALSSATNLGFMVLPNYRAWVVVASLVICFATWYVIEKTRLGAYLRAGTENPRLVEAFGV 188
             LS A  +G  V P YR +V+ AS  +    W ++E+TR GA +RA  ++  +  A GV
Sbjct: 123 PELSGAVRIGDAVFPRYRLFVIGASAAVALGLWLLVERTRAGAMIRAAVDDVGMARAIGV 182

Query: 189 NVPLMITLTYAFGCALAAFAGVLAAPVMQVSPLMGQNLIIVVFAVVVIGGMGSIMGAILT 248
           +   + T  +  G ALA   GV+  P++ V P + Q+++ +   VV++GG GS++GA + 
Sbjct: 183 SASTLFTAVFCLGTALAGLGGVIGGPILSVYPSLDQDMLPLALLVVILGGAGSLVGAFVG 242

Query: 249 GLGLGVIEGFTKVFYPEASSTVVFVIMVIVLLIRPAGLFGK 289
              +G I  F +V  P+ +  ++F+ M+ VL + P GLFG+
Sbjct: 243 AYAIGFIYTFGQVLVPDLAYVILFLPMIAVLSVAPQGLFGR 283