Pairwise Alignments

Query, 291 a.a., Broad-specificity amino acid ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 286 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  230 bits (587), Expect = 2e-65
 Identities = 114/281 (40%), Positives = 179/281 (63%), Gaps = 1/281 (0%)

Query: 9   LSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLTWMAMEYFGINYWVM 68
           L Q+L GL  G  Y ++S+GL +IFGLLN +NFAHGA F+LGA + + A+   G N+W+ 
Sbjct: 6   LFQILNGLGLGMIYFLISVGLTIIFGLLNFVNFAHGAFFLLGAYICYTAVSLTG-NFWLA 64

Query: 69  LIAAPIVIGIFGVLIERLLLRWIYKLDHLYGLLLTLGLTLLIEGVFRSVYGVSGLPYDAP 128
           L+ AP+V+     +IER+L++ IY L H++ +L+TLG+ L+I+     ++G  G     P
Sbjct: 65  LLIAPLVVAALAWVIERVLIQRIYHLPHMFQILVTLGIALIIQEASVMIWGPVGKSVAVP 124

Query: 129 DALSSATNLGFMVLPNYRAWVVVASLVICFATWYVIEKTRLGAYLRAGTENPRLVEAFGV 188
           + L     +G  V P YR +++V S ++    W ++E+TR GA +RAG+E+   V   G 
Sbjct: 125 ELLRGVLVVGDFVYPYYRLFLIVFSGLVGLGLWLLLERTRFGALVRAGSESTETVSLLGT 184

Query: 189 NVPLMITLTYAFGCALAAFAGVLAAPVMQVSPLMGQNLIIVVFAVVVIGGMGSIMGAILT 248
           N+  + ++T+A G ALA  AGVL AP+    P +G  ++ V F VVVIGGMGS  GA++ 
Sbjct: 185 NIFRLFSMTFALGVALAGVAGVLFAPLRGAQPFVGPEILGVAFVVVVIGGMGSFSGALVG 244

Query: 249 GLGLGVIEGFTKVFYPEASSTVVFVIMVIVLLIRPAGLFGK 289
           GL +GV++      +P+ +S +++  M +V+L+RP GLFG+
Sbjct: 245 GLLVGVVQSLMTTLWPQGASLMIYGAMAVVILVRPYGLFGR 285