Pairwise Alignments

Query, 291 a.a., Broad-specificity amino acid ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 286 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  222 bits (565), Expect = 9e-63
 Identities = 113/281 (40%), Positives = 173/281 (61%), Gaps = 1/281 (0%)

Query: 9   LSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLTWMAMEYFGINYWVM 68
           L QLL GL  G  Y ++++GL +IFGLLN +NFAHGA F+LGA L + A+   G N+W+ 
Sbjct: 6   LFQLLNGLGLGMIYFLIAVGLTIIFGLLNFVNFAHGAFFLLGAYLCYTAVAVTG-NFWLA 64

Query: 69  LIAAPIVIGIFGVLIERLLLRWIYKLDHLYGLLLTLGLTLLIEGVFRSVYGVSGLPYDAP 128
           L+ AP+V+      +ERLL++ IY L H + +L+TLG+ L+I+     ++G  G     P
Sbjct: 65  LLIAPLVVAALAWAVERLLIKRIYHLPHTFQILVTLGIALIIQEASVLIWGPVGKNIAVP 124

Query: 129 DALSSATNLGFMVLPNYRAWVVVASLVICFATWYVIEKTRLGAYLRAGTENPRLVEAFGV 188
             L     LG  + P YR +++  + +I    W ++E+TR GA +RAG+E+   V   G 
Sbjct: 125 PELRGVLILGDFIYPYYRLFLIGFAALIGIGLWLLLERTRFGALVRAGSESTETVSLLGT 184

Query: 189 NVPLMITLTYAFGCALAAFAGVLAAPVMQVSPLMGQNLIIVVFAVVVIGGMGSIMGAILT 248
           N+  + +LT+A G  LA  AGVL AP+    P +G  ++ + F VVVIGGMGS  GA++ 
Sbjct: 185 NIFRLFSLTFALGVGLAGVAGVLFAPLRGAQPFVGPEILGIAFVVVVIGGMGSFGGALVG 244

Query: 249 GLGLGVIEGFTKVFYPEASSTVVFVIMVIVLLIRPAGLFGK 289
           GL +GV++      +P+ +S +++  M  V+L+RP GLFG+
Sbjct: 245 GLLVGVVQSMMTSLWPQGASLMIYGAMAAVILVRPYGLFGR 285