Pairwise Alignments

Query, 291 a.a., Broad-specificity amino acid ABC transporter, permease protein 1 from Variovorax sp. SCN45

Subject, 286 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  187 bits (475), Expect = 2e-52
 Identities = 109/280 (38%), Positives = 162/280 (57%), Gaps = 2/280 (0%)

Query: 9   LSQLLLGLVNGSFYAILSLGLAVIFGLLNVINFAHGALFMLGAVLTWMAMEYFGINYWVM 68
           L Q+L G+  G    +++ GL +IFG++ +IN AHGA +MLGA L +      G     +
Sbjct: 7   LIQVLNGVQYGLLLFLVASGLTLIFGIMGIINLAHGAFYMLGAYLAYWLARTTGSLGAAV 66

Query: 69  LIAAPIVIGIFGVLIERLLLRWIYKLDHLYGLLLTLGLTLLIEGVFRSVYGVSGLPYDAP 128
           L++ PI   I G  IE LL+R +Y+ DHL  +LLT GL L+     R ++G        P
Sbjct: 67  LLSLPIAAAI-GYGIEALLVRTLYRRDHLDQVLLTYGLILIFNEATRMIWGADVHGVAVP 125

Query: 129 DALSSATNL-GFMVLPNYRAWVVVASLVICFATWYVIEKTRLGAYLRAGTENPRLVEAFG 187
            AL+ +  L   +  P YR  +     V+    + VI +TR G ++RAG  N  +V A G
Sbjct: 126 AALNWSIRLTDTLSYPVYRLMLSGVCAVLAVGMYLVITRTRFGMWVRAGASNRDMVAALG 185

Query: 188 VNVPLMITLTYAFGCALAAFAGVLAAPVMQVSPLMGQNLIIVVFAVVVIGGMGSIMGAIL 247
           +NV L+  + +A G ALA  AG ++ P+  V+P MG +++I+ F VVVIGG+GSI GA L
Sbjct: 186 INVKLLFGVVFALGAALAGLAGAISTPITSVAPGMGDSVLILCFVVVVIGGVGSIKGAFL 245

Query: 248 TGLGLGVIEGFTKVFYPEASSTVVFVIMVIVLLIRPAGLF 287
             + +G+ + F KVF P+ +S  V+ +M  VLL +P GLF
Sbjct: 246 GAMLIGLADTFGKVFAPDFASFTVYGVMAAVLLWKPRGLF 285