Pairwise Alignments

Query, 397 a.a., Broad-specificity amino acid ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 409 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  340 bits (872), Expect = 4e-98
 Identities = 176/395 (44%), Positives = 250/395 (63%), Gaps = 2/395 (0%)

Query: 5   AVFSAVSLAIALAAGAAQAQEKVKIGFITDMSSLYADVEGKNGALAIQMAIDDFGGKVNG 64
           A  +A   A    A A     K+++G +TD+S   +D  G    ++ ++A +DF  +  G
Sbjct: 14  AFLAAAHFAAPTPARAEIPGNKIRLGVLTDLSGFASDSTGMGSVVSARLAAEDFKKEHPG 73

Query: 65  MPIELLQADHQNKADIAASKAREWIDTQGLTMLFGGTSSGTGLAMAKVAQEKKRVFIVNG 124
           + +E++  DHQNK DI ++  R+WI    + ++     S   LA+ + A+     FI +G
Sbjct: 74  IDVEVISVDHQNKPDIGSATTRKWIADGTVDVILDVPFSSVALAVQEAARGSNVAFIASG 133

Query: 125 AGSSALTNEQCSPYTVHYAYDTVALAKGTGSAVIARGDKSWFFLTADYAFGQALEADASK 184
            G++ LT E+CSP TVH+ YDT ALA GT  A++     +WFF+TADYAFG ALEADA  
Sbjct: 134 PGTALLTGEKCSPNTVHWTYDTWALAHGTALALLKAKKDTWFFVTADYAFGHALEADAMA 193

Query: 185 VVKEKGGTVVGSVKHPLNTSDFSSFLLQAQNSKAQVLALANAGGDTQNAIKAAKEFGISK 244
           VVK + G ++GSV+HP N SDFSSF+LQAQ S AQV+ALANA GDT N++KAA EFG+++
Sbjct: 194 VVKAENGKILGSVRHPTNASDFSSFILQAQASGAQVVALANAVGDTINSVKAAAEFGLTQ 253

Query: 245 TMKMVGLLVFVTDVHSLGLKNTEGLLLTTSWDWNLDDKTRAFGKRF-FEKTKRMPTDIQA 303
              +  LL+ +TDVHSLGL   +GL LT  + WN++D TRA+  RF  +   R PT  QA
Sbjct: 254 KQSLAALLMQLTDVHSLGLPVAKGLFLTEGFYWNMNDGTRAYADRFAAQMNGRRPTANQA 313

Query: 304 ADYSATMTYLKAVQAAKSIDADTVMAQIKKTPIDD-FYAKGFVREDGRFVHDMYLVQVKS 362
             YS  + YL+A  AA + +   V+A++K+ P DD  + KG VR DGR +H+MYL QVK+
Sbjct: 314 GVYSGALHYLRAAAAANTTEGQKVVAKMKEMPSDDPLFGKGQVRADGRHIHNMYLFQVKT 373

Query: 363 PAESKQPWDYYKVVQKLKGEEVFTTKAESKCALWK 397
           P +SK PWDYY +V+ +  ++ F   AE  C + K
Sbjct: 374 PDQSKGPWDYYNLVETIPAKDAFRPIAEGNCPMVK 408