Pairwise Alignments

Query, 440 a.a., Multidrug efflux system EmrAB-OMF, membrane fusion component EmrA from Variovorax sp. SCN45

Subject, 348 a.a., secretion protein HlyD from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  186 bits (473), Expect = 8e-52
 Identities = 117/348 (33%), Positives = 190/348 (54%), Gaps = 7/348 (2%)

Query: 26  KRRRALTALAAVVIVAGGGWGLYEWLVASHYEDTDNAYVSGNVIQITPQIGGTVMSINAD 85
           K  + L  + A +I+ GGG+G+ E+L  S +EDTD+A +  ++  +  ++GG V +I  +
Sbjct: 8   KPNKVLIVILAAIILIGGGYGVKEYLYLSKHEDTDDAQIDADISPVVARVGGYVDTIMFE 67

Query: 86  DTDFVKAGQPLVQLDPADAKVALEQAEAALAQAVRQVRTLYANNGSLAAQVTLRQSDIVK 145
           +   VK GQ LV+LD  D ++ LEQA AA   A   +    A   +  A  +  +S+   
Sbjct: 68  ENQHVKQGQLLVKLDERDYRIKLEQALAAQHGASAGIDVTQAQVSTTRANASTARSNAEA 127

Query: 146 AQSDIAKAQDDLQRRRALSGNGAVSKEELNHAETALDTAKSQLAAAQAGVIAAKEALVSN 205
           A+  + +A++D +R   L  +G++++++ + A+   D A++   AAQ    AA+E + + 
Sbjct: 128 AKVKLWQAEEDFKRYANLVQDGSITQQQFDQAKAQRDAARAAYQAAQDQYRAAQEQIKTT 187

Query: 206 QSLTEGTSVAQHPSVLAAAAKVREAYLATQRVAMPAPVDGYVAKRTVQLGQRVAAGTPMM 265
           QS     ++     V    A V  A L      + AP  G V+K+++Q GQ V  G  + 
Sbjct: 188 QSQLAVNNI----GVDQRQADVDFAKLQLSYTNIEAPAGGIVSKKSIQKGQLVQPGQTLF 243

Query: 266 SIVPLNQLWVDANFKEVQLRNIRIDQPVKLTADVYGKKVEYTGKVAGLGVGTGSAFALLP 325
           SIV  N L+V ANFKE QL N+   Q V +  D + ++ +  G++      TG+ F+LLP
Sbjct: 244 SIVNDNSLYVTANFKETQLENLHEGQHVDIRVDAFPEE-KIEGEIYNFSPATGAKFSLLP 302

Query: 326 AQNATGNWIKVVQRVPVRIALDPEQLKANPLRIGLSMDAEVDISSKSG 373
             NATGN++KVVQRVPV+I L   +     LR G+S+   V + +K G
Sbjct: 303 PDNATGNFVKVVQRVPVKIKLKASEEVLKKLRAGMSV--YVSVLTKEG 348