Pairwise Alignments

Query, 446 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Variovorax sp. SCN45

Subject, 453 a.a., NADH-quinone oxidoreductase subunit F from Pseudomonas putida KT2440

 Score =  337 bits (863), Expect = 6e-97
 Identities = 178/406 (43%), Positives = 253/406 (62%), Gaps = 7/406 (1%)

Query: 33  DGTNWRLADYEARGGYQALRKILTEGLTPDQVIAEVKASGLRGRGGAGFPTGLKWSFMPR 92
           DG    LA+YE++ GY A RK L + ++ D ++  VK SGL+GRGGAGFPTG+KW  MP+
Sbjct: 28  DGEPVWLAEYESKNGYAAARKALAQ-MSADDIVQSVKDSGLKGRGGAGFPTGVKWGLMPK 86

Query: 93  -QFPGQKYLVCNSDEGEPGTCKDRDILQFNPHIVIEGMAIAAYAMGISVGYNYIHGEIFQ 151
            +    +YL+CN+DE EP T KDR +++  PH+++EGM I+A A+    GY ++ GE   
Sbjct: 87  DESMNIRYLLCNADEMEPNTWKDRMLMEQQPHLLVEGMLISARALKAYRGYIFLRGEYTT 146

Query: 152 SYDRFEEALEEARAAGYLGDKIMGSTYNFQLHAAHGFGAYICGEETALLESLEGKKGQPR 211
           +      A++EA+AAG LG  I+GS ++F+L    G G YICGEETAL+ SLEG++  PR
Sbjct: 147 AAKNLNRAIDEAKAAGLLGKNILGSGFDFELFVHTGAGRYICGEETALINSLEGRRANPR 206

Query: 212 FKPPFPASFGLYGKPTTINNTETFAAVPWIIRNGGPAYLECGK--PNNGGTKIYSVSGDV 269
            KPPFPA+ G++GKPT +NN ET   VP I+ NG   Y    +    + GTK+   SG V
Sbjct: 207 SKPPFPAAVGVWGKPTCVNNVETLCNVPAIVANGNDWYKSLAREGSEDHGTKLMGFSGKV 266

Query: 270 ELPGNYEVPMGTPFSKLLE-LAGGVRKGRTLKAVIPGGSSSPVLPADIMMACTMDYDSIA 328
           + PG +E+P G    +L E  AGG+R G  LK   PGG+ +  L  + + A  M    IA
Sbjct: 267 KNPGLWELPFGVTARELFEDYAGGMRDGFKLKCWQPGGAGTGFLLPEHLDA-QMYAGGIA 325

Query: 329 KAGSMLGSGAVIVMDDSRSMVESLKRLSYFYMHESCGQCTPCREGTGWLYRVVDRIHNGQ 388
           K G+ +G+G  + +DDS +MV  L+ +  F+  ESCG CTPCR+G  W  +++  + NGQ
Sbjct: 326 KVGTRMGTGLAMAVDDSINMVSLLRNMEEFFARESCGWCTPCRDGLPWSVKMLRALENGQ 385

Query: 389 GKPSDMQLLDSVAGDI-MGRTICALGDAAAMPVRAMIKHFRHEFEA 433
           G+  D++ L  +   +  GRT CA    A  P+ + IK+FR EFEA
Sbjct: 386 GRAEDIETLLGLVNFLGPGRTFCAHAPGAVEPLGSAIKYFRSEFEA 431