Pairwise Alignments

Query, 446 a.a., NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3) from Variovorax sp. SCN45

Subject, 525 a.a., putative Formate dehydrogenase, beta subunit from Pseudomonas putida KT2440

 Score =  277 bits (709), Expect = 5e-79
 Identities = 160/397 (40%), Positives = 219/397 (55%), Gaps = 7/397 (1%)

Query: 39  LADYEARGGYQALRKILTEGLTPDQVIAEVKASGLRGRGGAGFPTGLKWSFMPRQFPGQK 98
           L DY A GG+  L   +   L   +V+A V  SGLRGRGGA FP G+KW  +     GQK
Sbjct: 123 LDDYRANGGFAGLEAAVA--LDGAEVVAAVLDSGLRGRGGAAFPAGIKWRTVRDAGAGQK 180

Query: 99  YLVCNSDEGEPGTCKDRDILQFNPHIVIEGMAIAAYAMGISVGYNYIHGEIFQSYDRFEE 158
           Y+VCN+DEG+ GT  DR +++ +P ++IEGM IA  A+G   GY Y+  E   +    ++
Sbjct: 181 YVVCNADEGDSGTFADRMLMEGDPFLLIEGMIIAGLAVGADKGYIYVRSEYPDAIRVLDQ 240

Query: 159 ALEEARAAGYLGDKIMGSTYNFQLHAAHGFGAYICGEETALLESLEGKKGQPRFKPPFPA 218
           A   AR AGYLG  + GS   F L    G GAYICGEETALLES+EGK+G  R KPP PA
Sbjct: 241 AFAIARDAGYLGADVAGSGQAFDLEVRVGAGAYICGEETALLESIEGKRGIVRAKPPLPA 300

Query: 219 SFGLYGKPTTINNTETFAAVPWIIRNGGPAYLECGKPNNGGTKIYSVSGDVELPGNYEVP 278
             GL+G PT ++N  T A+VP I+  G   Y + G   + GT  + ++G++   G  E  
Sbjct: 301 LQGLFGLPTLVHNVLTLASVPIILAKGAAFYRDFGMGRSLGTMPFQLAGNIRQGGLVERA 360

Query: 279 MGTPFSKLLE-LAGGVRKGRTLKAVIPGGSSSPVLPADIMMACTMDYDSIAKAGSMLGSG 337
            G    +L+E   GG   GR LKA   GG     +P        +DY++ A  G+MLG G
Sbjct: 361 FGLTLRELVEGYGGGTASGRPLKAAQVGGPLGAWVPPS-HFDTPLDYEAFAAVGAMLGHG 419

Query: 338 AVIVMDDSRSMVESLKRLSYFYMHESCGQCTPCREGTGWLYRVVDRIHNGQG---KPSDM 394
            V+V DD+ +M    +    F   ESCG+CTPCR G+     VVDR+        +    
Sbjct: 420 GVVVADDTLNMASMARFALQFCAEESCGKCTPCRIGSTRGMEVVDRLIASSDITERHDQA 479

Query: 395 QLLDSVAGDIMGRTICALGDAAAMPVRAMIKHFRHEF 431
            LL  +   +   ++CA+G   A PV + +K+F  +F
Sbjct: 480 LLLRDLCDTLQYGSLCAMGGMTAYPVASALKYFPADF 516