Pairwise Alignments

Query, 777 a.a., Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) from Variovorax sp. SCN45

Subject, 566 a.a., 30S ribosomal protein S1 from Agrobacterium fabrum C58

 Score = 58.9 bits (141), Expect = 7e-13
 Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 3/105 (2%)

Query: 595 GTITIASTDPEKAELAKKRIEQITAEVEIGKVYEGPVTKILDFGALINLLPGKDGLLHIS 654
           G I ++     +   A++R E I   +E G+V +G V  I D+GA ++L  G DGLLH++
Sbjct: 170 GNIVVSRRTVLEESRAEQRSE-IVQNLEEGQVVDGVVKNITDYGAFVDL-GGIDGLLHVT 227

Query: 655 QIAHERVEKVTDYLSEGQIVKVKVLE-TDEKGRVKLSMKALTERP 698
            +A  RV   ++ L+ GQ VKV+++    E  R+ L MK L   P
Sbjct: 228 DMAWRRVNHPSEILNIGQQVKVQIIRINQETHRISLGMKQLESDP 272



 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 9/119 (7%)

Query: 589 INIDEDGTITIASTDPE--KAELAKKRIEQ-----ITAEVEIGKVYEGPVTKILDFGALI 641
           +NI +   + I   + E  +  L  K++E      I+A+  +GK   G VT I D+GA +
Sbjct: 241 LNIGQQVKVQIIRINQETHRISLGMKQLESDPWDGISAKYPVGKKISGTVTNITDYGAFV 300

Query: 642 NLLPGKDGLLHISQIAHERVE-KVTDYLSEGQIVKVKVLETD-EKGRVKLSMKALTERP 698
            L PG +GL+HIS+++  +        LS  Q V V VLE D  K R+ L +K   E P
Sbjct: 301 ELEPGIEGLIHISEMSWTKKNVHPGKILSTSQEVDVVVLEVDPSKRRISLGLKQTLENP 359



 Score = 47.4 bits (111), Expect = 2e-09
 Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 9/124 (7%)

Query: 586 GTTINIDEDGTITIASTDPEKAELA---KKRIEQ----ITAEVEIGKVYEGPVTKILDFG 638
           G  ++  ++  + +   DP K  ++   K+ +E            G   EG V    +FG
Sbjct: 325 GKILSTSQEVDVVVLEVDPSKRRISLGLKQTLENPWQAFAFSHPAGTEVEGEVKNKTEFG 384

Query: 639 ALINLLPGKDGLLHISQIAHERV-EKVTDYLSEGQIVKVKVLETD-EKGRVKLSMKALTE 696
             I L    DG++H+S +   R  E+V +  ++G +VK  VL+ D EK R+ L +K L +
Sbjct: 385 LFIGLEGDVDGMVHLSDLDWNRPGEQVIEEFNKGDVVKAVVLDVDVEKERISLGIKQLGK 444

Query: 697 RPAG 700
              G
Sbjct: 445 DAVG 448