Pairwise Alignments

Query, 426 a.a., ABC transporter, substrate-binding protein RSc1750 from Variovorax sp. SCN45

Subject, 400 a.a., ABC transporter, substrate-binding protein (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 13/258 (5%)

Query: 8   RRETLKFAALALCARPFAALAQTSSAPIRLALIESMSGPFANTGEAVFRNLLWAVERVNA 67
           RR  +  +A    A  F  +A      +++ ++  ++G  A +G+      L A+E +NA
Sbjct: 4   RRSFVSQSAALATAVAFPLVAGAQPKTVKVGVLHPVTGALAYSGQQCRLGALMAIEDINA 63

Query: 68  RGGVKLPGGARMLQLDRYDSKGQNEEALSALRAAMDDGARIVLQGNSSATAAALVDAIEK 127
            GG+K  GGA++  L   D++ Q +   + +    + G   ++   +SA   A   A  K
Sbjct: 64  AGGIKSLGGAKLEAL-LGDAQSQPQAGAAEVEKMNEAGVSAIVGAFASAICLATTQAAAK 122

Query: 128 NNERDVSRRVVFLNYAAVDPVLTNERCSFWHF--RFDAHADMRMAALMDVVK-DDAALKR 184
            N   V      ++    D ++     + + F   +    ++ MA L+ + K   +  K 
Sbjct: 123 YNLPHV------VDVGVADQIVERGLKNTFRFGPGYKKSTEVAMANLLVLNKAAGSPAKT 176

Query: 185 VYLIGQDYSFGQSVLREARRQLGAQRPDVEIVGDELHPMGKVKDFAPYATKIIASGAQAV 244
           V +I ++  FG    +   R+L     +V+ V    +P    +DF     ++ +     V
Sbjct: 177 VMVIHEESLFGAGTAQLLSRELPGYGFEVKEVVKHANP---TRDFNNIVLRMKSVNPDIV 233

Query: 245 VTGNWGNDLTLLVKAARE 262
           +  N+ N+  LLV+  ++
Sbjct: 234 IPANYYNEYALLVRTMQQ 251