Pairwise Alignments

Query, 426 a.a., ABC transporter, substrate-binding protein RSc1750 from Variovorax sp. SCN45

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 62.0 bits (149), Expect = 3e-14
 Identities = 99/388 (25%), Positives = 165/388 (42%), Gaps = 50/388 (12%)

Query: 7   LRRETLKFAALALCAR---PFAALAQTSSAPIRLALIESMSGPFANTGE-AVFRNLLWAV 62
           ++R TL  A LAL A    P  A    +  P+    ++SMSG FA+ G+ A   + L   
Sbjct: 1   MQRRTLLKAGLALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASYGKYADMGSRLAIA 60

Query: 63  ERVNARGGVKLPGGARMLQLDRYDSKGQNEEALSALRAAM-DDGARIVLQGNSSATAAAL 121
           E     G          L+    D++G   +A+  ++ A+  DGAR       S++A A+
Sbjct: 61  EHPQLLG--------HPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAV 112

Query: 122 VDAIEKNNERDVSRRVVFLNYAAVDPVLTNERCSFWHFRFD--AHADMRMAALMDVVKDD 179
              I K          VF+     D + T + C+   FR+    +  +R   L+ + +  
Sbjct: 113 SKEIHKAGG-------VFMTPVGADEI-TGKDCNASTFRWSVPTYGAIR-ETLVPMSRQL 163

Query: 180 AALKRVYLIGQDYSFGQSVLREARR---QLGAQRPDVEIVGDELHPMGKVKDFAPYATKI 236
              KR Y I   Y FG ++L  AR+   +LG     VE +G+  H + + ++F+ Y T  
Sbjct: 164 PQAKRWYTITPQYVFGDALLDNARKVFAELG-----VEHIGNSYHSL-QEQEFSGYLTNA 217

Query: 237 IASGAQAVVTGNWGNDLTLLVKAAREAGFNGTFYTF--YGNALGAPAAIGDAGIGRVVAV 294
           IA+    +V  N+G+  +  ++ A   G          +   L     +G   +  V   
Sbjct: 218 IAAKPDVLVLLNFGSQASNALRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLG 277

Query: 295 ADWLPNVQTAQSEAFYRAFRTRFP-----KPAEDYVHMRLALMIEALVQAVERAGNLDTV 349
           A +   V T  ++    A R  +        A DY+  +  +M+EA+V    +AG+LD  
Sbjct: 278 AQYWHQVDTPLNKLLVAATRKAYGINPNYPLAADYIGTK--VMLEAIV----KAGSLDGA 331

Query: 350 QVARALEQADVSLYGQRGR--MRAADHQ 375
            V+ AL+   +   G  G   +R  DHQ
Sbjct: 332 AVSAALQ--GMRFQGPTGEELIRPGDHQ 357