Pairwise Alignments

Query, 414 a.a., Nitrate ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 404 a.a., putative Nitrate-binding protein NasS from Pseudomonas putida KT2440

 Score =  430 bits (1105), Expect = e-125
 Identities = 199/389 (51%), Positives = 265/389 (68%), Gaps = 1/389 (0%)

Query: 27  PALRAAVWAQGSDKPEKEEVKIGFIPLTDCASVVMASVLGIDKKYGVKIVPSKEASWAGV 86
           P      W  GSD PEK  + IG++ LTDCASVV+A+  G  +++G+ +   ++ SWAG+
Sbjct: 5   PRATPLAWVNGSDAPEKTSLNIGYMALTDCASVVVAATQGFAQQHGLTLNLQRQGSWAGL 64

Query: 87  RDKLSNGDLDMAHVLYGLVYGMHLGLSG-PRKDMAVLMTLNNNGQAITLSKKLSDKGAVD 145
           RDKL +G+LD AH LYGLVY +HLG+ G P  DMAVLM LN N QAI LS  L  KG  +
Sbjct: 65  RDKLVSGELDAAHCLYGLVYAVHLGIGGVPASDMAVLMGLNQNAQAINLSPALQRKGVTN 124

Query: 146 AASLAKLIASEKREYTFAQTFPTGTHAMWLYYWLASAGIDPFKDVKNITVPPPQMVANMR 205
             +LA+L+       TFAQTFPTGTHAMWLYYWLAS GI P +DV ++ VPP QM A+++
Sbjct: 125 PEALARLVHQHGARLTFAQTFPTGTHAMWLYYWLASQGIHPLRDVDSVVVPPAQMAAHLQ 184

Query: 206 VGNMDGYCVGEPWGQRAIMDGIGITAITTQDIWKDHPEKVLGCTAEFTKKYPNTARAVTA 265
            G +DG+CVGEPW   A+  G G T  T+Q IW DHPEKVL C   F ++YPN+ARA+  
Sbjct: 185 AGRIDGFCVGEPWAADAVAKGQGFTLATSQSIWPDHPEKVLACARVFAEQYPNSARALIK 244

Query: 266 AILEAGKWIDAGLQNKNKMAETIADKSYVNTSVDAINQRILGRYTNGLGKSWDDPNHMKF 325
           AIL A ++I+   +N+   A+ ++  +Y++T +D+I  R+LG Y +GLG  W DP+ ++ 
Sbjct: 245 AILTASRFIEQSPENRRSTAQLLSASAYLDTPLDSIAPRLLGHYEDGLGNQWQDPHALRL 304

Query: 326 YNGGAVNFPYLSDGMWFLTQHKRWGLLKEHPDYLKVATEINRIDIYKQAAAATQTPVPKD 385
           ++ G  N PYLSDGMWF+TQ +RWGLL+E PDYL VA ++ ++ +Y +AA +     P  
Sbjct: 305 FDQGRANLPYLSDGMWFMTQFRRWGLLREDPDYLGVARQVQQLQLYSEAAQSLGIACPGQ 364

Query: 386 PMRTSKLFDGSVWDGKDPKKYADSFKLHA 414
           PMR+S L DGS WDG DP  YA SF LHA
Sbjct: 365 PMRSSLLIDGSRWDGSDPFGYARSFSLHA 393