Pairwise Alignments

Query, 414 a.a., Nitrate ABC transporter, substrate-binding protein from Variovorax sp. SCN45

Subject, 430 a.a., nitrate ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score =  272 bits (695), Expect = 2e-77
 Identities = 161/434 (37%), Positives = 245/434 (56%), Gaps = 26/434 (5%)

Query: 1   MTDLLKTRLSRRRVLQAAAIGAV--GIDPALRAAVWAQGSDKPEKEEVKIGFIPLTDCAS 58
           M  +    +SRR +L+  A  A+   +  A  +  +A  ++ PE +  K+GFI LTD A 
Sbjct: 1   MKKIFSGTVSRRTILKTTATAALVTAVRTAFPSGAFAATAE-PEVKGAKLGFIALTDAAP 59

Query: 59  VVMASVLGIDKKYGV-KIVPSKEASWAGVRDKL-----SNGDLDMAHVLYGLVYGMHLGL 112
           +++A+  G+  K+G+ ++   K+ASW   RD L     SNG +D AH+L  + Y MH G 
Sbjct: 60  LIIAAEKGLFAKHGMPEVEVLKQASWGATRDNLVLGGASNG-IDGAHILTPMPYLMHTGK 118

Query: 113 SGPRK---DMAVLMTLNNNGQAITLSKKLSDKGA-VDAASLAKLIASEK---REYTFAQT 165
                    M +L  LN + Q I+++K+ ++ G  +DA+ L      +K   +E   A T
Sbjct: 119 VTQNNVPVPMTILARLNLDSQGISVAKEYAETGVQLDASKLKAAFEKKKADGKEIKAAMT 178

Query: 166 FPTGTHAMWLYYWLASAGIDPFKDVKNITVPPPQMVANMRVGNMDGYCVGEPWGQRAIMD 225
           FP GTH +W+ YWLA+ GIDP KDV  I VPPPQMVANM+VGNMD +CVGEPW ++ +  
Sbjct: 179 FPGGTHDLWIRYWLAAGGIDPDKDVSTIVVPPPQMVANMKVGNMDVFCVGEPWNEQLVNQ 238

Query: 226 GIGITAITTQDIWKDHPEKVLGCTAEFTKKYPNTARAVTAAILEAGKWIDAGLQNKNKMA 285
           GIG TA TT ++WK HPEK LG  A++ +K PN  +A+  A++EA +W D  + NK +M+
Sbjct: 239 GIGFTACTTGELWKGHPEKALGMRADWVEKNPNATKALLMAVMEAQQWCDE-MANKEEMS 297

Query: 286 ETIADKSYVNTSVDAINQRILGRYTNGLGKSWDDPN-HMKFYNGGAVNFPYLSDGMWFLT 344
             +  + + N     +  R+ G    G G+  ++    MKF+   A ++P+ S   WF+T
Sbjct: 298 TILGKRQWFNVPPKDVLGRLKGNINYGNGRVLENTGLQMKFWQDHA-SYPFHSHDSWFIT 356

Query: 345 QHKRWGLLKEHPDYLKVATEINRIDIYKQAAAATQTPVPKDPMRTSK----LFDGSVWDG 400
           ++ RWG      D   +  ++NR DI++  AAA    V   P  TS+     FDG V+D 
Sbjct: 357 ENIRWGKFAPDTDVKALVAKVNREDIWR--AAAKDLGVADLPASTSRGKETFFDGKVFDP 414

Query: 401 KDPKKYADSFKLHA 414
           ++P  Y +S  + A
Sbjct: 415 ENPSAYLESLSIKA 428