Pairwise Alignments

Query, 306 a.a., Nitrate ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 281 a.a., Putative aliphatic sulfonates transport permease protein SsuC from Xanthobacter sp. DMC5

 Score =  126 bits (317), Expect = 5e-34
 Identities = 73/256 (28%), Positives = 129/256 (50%), Gaps = 25/256 (9%)

Query: 52  WMRVLPPL---AGFGL--LLLIWEIVA-MKSTTGFPTPA------ATWQQALTVFSDPFY 99
           W R+L      AG GL      W+ V  +    GF  P+      A W+ A+        
Sbjct: 26  WSRLLADKSVRAGLGLAAFFAFWQAVTGLGLVDGFLLPSPFAVAQALWEMAV-------- 77

Query: 100 SKGPNDQGVGWNVLSSLQRVALGFGLAALVGIPAGFAIGRFEFLSRMFNPLISLMRPVSP 159
                D  +  ++ +SLQRVA+GF LA +VG+  G   G +  +S    P++  +RP+ P
Sbjct: 78  -----DGSLWIHLAASLQRVAVGFLLACVVGLALGLVCGWWRSVSDFVRPVVEALRPIPP 132

Query: 160 LAWLPIGLLVFKGANPAAIWTIFICSIWPMVINTAVGVQRVPTDYMNVAKVLNLSEWKIL 219
           LAW+PI +L F   + A+ + +F+ +++P  + T   V+ +  + MN A  L    W++ 
Sbjct: 133 LAWIPITILWFGLGDAASYFLVFLGAVFPAFVATYTAVRGLDRNQMNAALCLGAKPWQLF 192

Query: 220 TKILFPSVLPYMLTGVRLAVGTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVANIIIAIF 279
             +L P+ LP +L G+R+A+G  W+ +V AE++    G+G+ +        + N++  + 
Sbjct: 193 WDVLIPASLPIILPGLRIALGVGWMCVVTAELIAAQTGLGYLIQQSRMLFQINNVVAGMV 252

Query: 280 VIGIVGLVLEFALIKL 295
            IG+VG  +   L ++
Sbjct: 253 TIGLVGFAMSAILERI 268