Pairwise Alignments

Query, 306 a.a., Nitrate ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 265 a.a., aliphatic sulfonate ABC transporter - permease subunit / transport of isethionate from Pseudomonas putida KT2440

 Score = 97.8 bits (242), Expect = 2e-25
 Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 14/240 (5%)

Query: 56  LPPLAGFGLLLLIWEIVAMK---STTGFPTPAATWQQALTVFSDPFYSKGPNDQGVGWNV 112
           L P A   LLL IW++       ST   P P+A     + +             G  W  
Sbjct: 13  LAPWALPVLLLAIWQLAVSAGWLSTRILPAPSAVVSAGVELVRS----------GEIWTH 62

Query: 113 LS-SLQRVALGFGLAALVGIPAGFAIGRFEFLSRMFNPLISLMRPVSPLAWLPIGLLVFK 171
           L+ S  R  LGF +   +G+  GF  G   +  R+ +  + ++R V  LA +P+ +L F 
Sbjct: 63  LAISGWRAGLGFVIGGSIGLVLGFITGLSNWGERLLDSSVQMIRNVPHLALIPLVILWFG 122

Query: 172 GANPAAIWTIFICSIWPMVINTAVGVQRVPTDYMNVAKVLNLSEWKILTKILFPSVLPYM 231
               A I+ + + +++P+ +NT  G++ V    + +A+   LS + +  +++ P  LP +
Sbjct: 123 IDESAKIFLVALGTLFPIYLNTYHGIRNVDPALVEMARSYGLSGFGLFRQVILPGALPSI 182

Query: 232 LTGVRLAVGTAWLVIVAAEMLTGGVGIGFWVWDEWNNLNVANIIIAIFVIGIVGLVLEFA 291
           L GVR A+G  WL ++ AE ++   GIG+   +    L    +++AI +  ++G + + A
Sbjct: 183 LVGVRFALGFMWLTLIVAETISANAGIGYLAMNAREFLQTDVVVLAIVLYAVLGKIADLA 242