Pairwise Alignments

Query, 265 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 224 a.a., glutamate/aspartate ABC transporter permease GltK from Escherichia coli ECRC62

 Score =  129 bits (323), Expect = 7e-35
 Identities = 76/213 (35%), Positives = 117/213 (54%), Gaps = 7/213 (3%)

Query: 45  YDWDFGVLWSYRRLLLIGLAYTLVFTVVCVVLGLAIGLITGLGRLSRNPWISAPIRAYIE 104
           Y++D+  +      LL GL  TL  TV  VV+G+  G +  + RLS    ++   +AY+ 
Sbjct: 2   YEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVMRLSSFAPVAWFAKAYVN 61

Query: 105 VFRCTPVLVQLVWFYYALPV-------LTGLEISAVAAATLCLSLYGGAFYSEIVRGGII 157
           VFR  P+++ L+WFY  +P        L+      + +A +  S++  A+YSEI+R GI 
Sbjct: 62  VFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMVAFSMFEAAYYSEIIRAGIQ 121

Query: 158 SIDNGQVEAARALGMTRMQLMRRIVLPQAFKRMVPPLMSQSIMQLKNTSLLSVLAVPDLL 217
           SI  GQ  AA ALGMT  Q M+ I+LPQAF+ MVP L++Q I+  ++TSL+ VL++ D  
Sbjct: 122 SISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLTQGIVLFQDTSLVYVLSLADFF 181

Query: 218 YQGQVIAHETYRPLELYTFIAVAYFAVLLPVTI 250
                I       +E+  F    YF + L  ++
Sbjct: 182 RTASTIGERDGTQVEMILFAGFVYFVISLSASL 214