Pairwise Alignments

Query, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 264 a.a., cystine transporter subunit from Pseudomonas simiae WCS417

 Score = 63.9 bits (154), Expect = 3e-15
 Identities = 68/251 (27%), Positives = 115/251 (45%), Gaps = 12/251 (4%)

Query: 8   IRALVAAVAACTLGPAFAQDQESSLARVQRTHVLRVGAIAGAIPYFAKDPGTGKWEGFGP 67
           +  L  A+ A  LG A A +Q   L  +++   +++G + G  P F+    +GK  GF  
Sbjct: 12  VGTLGLALGAGLLGQAVAGEQ---LDNIKKAGEIKIG-LEGTYPPFSFVDESGKLSGFEV 67

Query: 68  DFGESLAKSLGAKVEYVETTWGNAVLDLQSNKIDAMFG-LAPSPQRAAMVNFAD--TLFE 124
           +  E+LAK LG KV+   T W   +  L+S ++DA+   +  S +R    +F+   T+  
Sbjct: 68  ELSEALAKELGVKVKLQATPWDGILAALESKRLDAVVNQVTISEERKKKYDFSKPYTVSG 127

Query: 125 NTYTVVCKKGVPQKSWEQLNTPETKIVVDIGSSHDQLAQRVLPKADVTRLENSGAATMSL 184
               V+ K     K+ + L     K+ V +G++++Q  +   PKA +    +       L
Sbjct: 128 IQALVLTKNVGTIKTADDL--AGKKVGVGLGTNYEQWLKDNQPKAIIKTYNDDPTKFQDL 185

Query: 185 QAGRADCQVLVILLAEPLLAKRPGLGTMYIPQPVYTAPVSIGLRKDSDPGLQKAVNAWLA 244
           + GR D  +L+  LA    AK+    T             I LRK  +P L  AVN  L 
Sbjct: 186 RIGRID-TILIDRLAALEYAKK-AKDTSVTGDAFSRQEAGIALRK-GEPELLDAVNKALD 242

Query: 245 QERSKGEVRSV 255
           + R+ G ++ +
Sbjct: 243 KLRADGTLKKL 253