Pairwise Alignments

Query, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 259 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 63.2 bits (152), Expect = 6e-15
 Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 10/196 (5%)

Query: 41  LRVGAIAGAIPYFAKDPGTGKWEGFGPDFGESLAKSLGAKVEYVETTWGNAVLDLQSNKI 100
           LR G      P+ +K    G   GF  D G ++   L  K ++VE+ +   +  L++NK 
Sbjct: 28  LRFGVDPSYAPFESK-AADGSLVGFDIDLGNAICAELKVKCKWVESDFDGMIPGLKANKF 86

Query: 101 DAMF-GLAPSPQRAAMVNFADTLFENTYTVVCKKGVPQKSWEQLNTPETKIVVDIGSSHD 159
           D +   +  +P R   ++F+  LF    ++V KKG    + E L      +  + G+  +
Sbjct: 87  DGVISSMTVTPVREKAIDFSSELFSGPTSLVFKKGAGYSTPESLK--GKSVGYEQGTIQE 144

Query: 160 QLAQRVLPKADVT--RLENSGAATMSLQAGRADCQVLVILLAEPLLAKRP-GLG---TMY 213
             A+ VL KA VT     N       L +GR D  V  +L AE    K P G G   +  
Sbjct: 145 AYAKAVLDKAGVTTKAYANQDQVYADLTSGRLDASVQDMLQAELGFLKSPAGAGYEVSAA 204

Query: 214 IPQPVYTAPVSIGLRK 229
           I  P+  +  +IG++K
Sbjct: 205 IDDPLLPSKTAIGIKK 220