Pairwise Alignments

Query, 277 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score = 67.4 bits (163), Expect = 3e-16
 Identities = 68/249 (27%), Positives = 114/249 (45%), Gaps = 20/249 (8%)

Query: 10  ALVAAVAACTLGPAFAQDQESSLARVQRTHVLRVGAIAGAIPYFAKDPGTGKWEGFGPDF 69
           +L   + A  L  AFA +Q   L  +Q   V+ VG + G  P F+     GK  GF  + 
Sbjct: 12  SLALLLGAGLLSQAFAGEQ---LKTIQEKGVINVG-LEGTYPPFSFQDENGKLTGFEVEL 67

Query: 70  GESLAKSLGAKVEYVETTWGNAVLDLQSNKIDAMFG-LAPSPQRAAMVNFADTLFENTYT 128
            E LAK LG K +   T W   +  L+S ++D +   +  S +R    +F++      YT
Sbjct: 68  SELLAKELGVKAKIQPTKWDGILAALESKRLDVVVNQVTISEERKKKYDFSE-----PYT 122

Query: 129 VV-CKKGVPQKSWEQLNTPET------KIVVDIGSSHDQLAQRVLPKADVTRLENSGAAT 181
           V   +  + +K  EQLN          K+ V +G++++Q  ++ +P+ADV   E+  +  
Sbjct: 123 VSGIQALILKKKAEQLNIKGAQDLAGKKVGVGLGTNYEQWVKKDVPQADVRTYEDDPSKF 182

Query: 182 MSLQAGRADCQVLVILLAEPLLAKRPGLGTMYIPQPVYTAPVSIGLRKDSDPGLQKAVNA 241
             L+ GR D  +L+  LA    A++    T             + LRK  +P L  A+N 
Sbjct: 183 ADLRNGRIDA-ILIDRLAALEYAQK-AKDTELAGDAFSRLESGVALRK-GEPELLAAINK 239

Query: 242 WLAQERSKG 250
            + + ++ G
Sbjct: 240 AIDKLKADG 248