Pairwise Alignments

Query, 300 a.a., Na(+) dependent transporter,Sodium Bile acid symporter family from Variovorax sp. SCN45

Subject, 321 a.a., sodium transporter from Pseudomonas simiae WCS417

 Score =  140 bits (354), Expect = 3e-38
 Identities = 84/278 (30%), Positives = 152/278 (54%), Gaps = 11/278 (3%)

Query: 22  VLGFLMFGIALDTRIEDFKRVARMPGAMAVGIGAQFVVLPAVTFALTLILKPGPSIALGM 81
           +LG +MFG+ L  +I+DF  VAR P  +A+G+ A FV++P + + L       P IA+G+
Sbjct: 43  LLGLVMFGMGLTLKIDDFAEVARHPWRVALGVVAHFVIMPGMAWLLCQAFHLPPEIAVGV 102

Query: 82  ILVACCPPGNISQILTHRARGNVALSVSMTAISNAISIVVMPLNFAFWGGLHPSAAPLLK 141
           ILV CCP G  S ++T  ARG++ALSV++ A++  ++ ++ P     W  L  SA     
Sbjct: 103 ILVGCCPSGTSSNVMTWLARGDLALSVAIAAVTTLLAPLLTPA--LIW--LLASA----- 153

Query: 142 TIALDPLDMLGHIVMIIGIPFVLGVACSHRLPALTARIKKPVGAVSFIALIVFIVGAIAG 201
            + +  +++   I+ ++ +P VLGV     L        + +  VS +++++ +   +A 
Sbjct: 154 WLPVSFMELFWSILQVVLLPIVLGVLAQRVLGERVRHAVEVLPLVSVVSIVIIVAAVVAA 213

Query: 202 NWRFFLDYVGLVLLAVVIHDALAFGTGYLCARLSGLGDYDRRAVAIEVGIRNSGLGLVLI 261
           +     +   L++  V++H++  +  GY   R+  L    R+++A+EVG++NSGLG  L 
Sbjct: 214 SQAKIAESGLLIMAVVMLHNSFGYLLGYFTGRVFQLPLAQRKSLALEVGMQNSGLGAALA 273

Query: 262 FSFFGGLGGMAVVAGVWGFWDIIAGLALAGWWGRRPVK 299
            + F  L   AV + ++  W  I+G  L+ ++ R   K
Sbjct: 274 SAHFSPLA--AVPSALFSVWHNISGALLSTYFRRMSEK 309