Pairwise Alignments

Query, 324 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  171 bits (434), Expect = 2e-47
 Identities = 106/262 (40%), Positives = 144/262 (54%), Gaps = 5/262 (1%)

Query: 6   IDLRAWRQFVAVAEELHFGRAALRLHMTQPPVTQAIAQLEKALGVVLFDRTRRRVALTPA 65
           ++LR  R F+AVAEELHFGRAA +L ++QPP++Q I  LE+ LG  LFDRT RRV L+ A
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 66  GEALLPDVRELLARAQALPARARAAAAGQVGRVRIAFVSTVGF-ERLPAWVREFRVLCPE 124
           G   L + R++LA+ +     AR A  G++G ++I F S+  F  ++P  +  FR   P 
Sbjct: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPA 120

Query: 125 VALELVEATGDVQLEAFARGEIDAGLMLHSPGAAPPGLARLAVSEEPLVLALPERHALAQ 184
           V L L E +     E      I+ GLM   P   P GL    +  EPLV  +   H LA+
Sbjct: 121 VHLNLKEMSSRDVAEGVFDESIEVGLM--RPMPLPEGLVATELFREPLVAVINASHPLAE 178

Query: 185 TPR--LLMSEVLAEPLVIFPRRIVPSLHDAIFGLYHAAGRVPQLGQEAIQMQTIVNLVSG 242
                + M+ +  EP V FPR     LH  +  L   AG  P   QEA +  TI+ LVS 
Sbjct: 179 GTEQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSA 238

Query: 243 GIGVAWVPESVTQFRRAGVVYR 264
           G+GV+ +P S  + R  GVVYR
Sbjct: 239 GLGVSVLPASFQRMRIEGVVYR 260