Pairwise Alignments

Query, 1070 a.a., Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA from Variovorax sp. SCN45

Subject, 1045 a.a., CusA/CzcA family heavy metal efflux RND transporter from Rhodanobacter sp000427505 FW510-R12

 Score =  642 bits (1655), Expect = 0.0
 Identities = 369/1053 (35%), Positives = 588/1053 (55%), Gaps = 34/1053 (3%)

Query: 1    MFERIIRFSIEQRWLILLAVLGMAALGIFSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M   +IR +I  R  +LLA L +AA G+FS  + P+DA+PD+++ QV I T+  G SP  
Sbjct: 1    MIAALIRAAIANRVFVLLAALALAAAGVFSLTRTPLDALPDLSDTQVIIRTSWAGQSPQV 60

Query: 61   TEQRVTYPIETVMAGLPGLQQTRSLSRYGLSQVTVIFKDGTDIYFARQLVNERIQSARES 120
             E ++TYP+ T M  +PG +  R+ S +G S V V+F D TD+Y+AR  V E +   R+ 
Sbjct: 61   VEDQITYPLATTMLSVPGAKTVRAYSFFGDSYVYVLFDDSTDLYWARSRVLEYLSQVRDQ 120

Query: 121  MPRGISPVIGPISTGLGEIYLWTVEAEEGARKADGKPYSSTDLREIQDWIIKPQLRNVAG 180
            +P G++P +GP +TGLG +Y + +    G        +   +LR +QDW ++ QL+ V  
Sbjct: 121  LPVGVNPSLGPDATGLGWVYEYALVDRTG-------KHDLGELRALQDWFLRYQLKTVPD 173

Query: 181  VTEINSIGGYAKEFQISPDPAKLLAHGLTMTDLVTALERNNANVGAGYIEKRGEQYLIRA 240
            + E+ S+GG  + +QI PDP  L A G+T+  L  A+   N   G   +E+   + ++R+
Sbjct: 174  IAEVASLGGMERAWQIVPDPRALTARGITVAQLTDAVRAANGAGGGSVVEQGEAELMVRS 233

Query: 241  PGQVKSVEDIGNV-ILGNANGIPLRVQDVAEVGIGKELRTGAATDNGR-EVVLGTVFMLI 298
             G ++S ED  NV I  N NG+P+ +++VA V  G   R G    +G+ EVV G   +  
Sbjct: 234  EGYLRSREDFENVPISTNTNGVPVLLREVATVRRGPSFRRGIVELDGQGEVVGGVAVLRS 293

Query: 299  GENSRTVSQAVDRKMQEINRTLPAGVKAVTVYDRTVLVDKAIATVKKNLFEGAVLVIAIL 358
            G+N++   +AV  K+ E+ R+LPAGV+ V  YDR+ L+D A+  +   L E  ++V  + 
Sbjct: 294  GKNAKAAIEAVKAKLTELKRSLPAGVEIVPTYDRSQLIDAAVENLWGKLLEEFLVVALVC 353

Query: 359  FLFLGNIRAALITALVIPLSMLFTFTGMVNQKVSANLMSLG--ALDFGIIIDGAVVIVEN 416
             LFLG++R+AL+  + +PL +L  F  +  Q VSANLMSLG  A+  G ++D AVV++EN
Sbjct: 354  VLFLGHLRSALVAVVSLPLGVLAAFIALHLQGVSANLMSLGGIAIAIGAMVDAAVVMIEN 413

Query: 417  CVRRLAH-AQAHKGRPLTRSERFHEVFAASQEARRPLLFGQLIIMIVYLPIFALTGVEGK 475
              + L H   AH G     + R+  V  A+ E    L    LII + ++P+FAL G EGK
Sbjct: 414  THKHLEHWRDAHDGGEPQGAVRWSVVVEAAAEVGPALFISLLIIALSFIPVFALQGQEGK 473

Query: 476  LFHPMAFTVVIALLGAMILSITFIPAAVALFIGNKV-SEKENRLMVWAKRGYEPLLARVM 534
            LF P+AFT   A+  A  L++T +P  +   I  ++  E  N L       Y P+L  V+
Sbjct: 474  LFKPLAFTKTYAMAAAAGLAVTLVPVLMGYLIRGRIRPEHTNPLNRGLIALYRPILEAVL 533

Query: 535  GAKPLVITTAVVAVLLSGLLATRLGTEFVPSLSEGDFAIQALRIPGTSLTQSVEMQKQLE 594
                  +  A + +L + L  +RLG+EF+P++ EG        +PG S  ++ ++ +  +
Sbjct: 534  HHPKTTLALAGLLLLTALLPLSRLGSEFMPAMDEGTLLYMPTALPGLSAGKASQLLQLTD 593

Query: 595  RTLKEKFPEIERIFARTGTAEIASDPMPPNISDGYIMLKPESEWPKPRRSRAEVLAAVQE 654
            R +K   PE++ +F + G A  A+DP P  + +  I  KP+ +W +P  + A++ A + +
Sbjct: 594  RMIK-TVPEVDHVFGKAGRANTATDPAPLEMFETTITFKPKDQW-RPGMTMAKIKAELNK 651

Query: 655  EVEKLPGNNYEFSQPIQLRFNELISGVRSDVAVKIFGDDMDVLNKTAAEVSEALGKIAGA 714
             V+ +PG    F  P++ R + L +G++S + +K+ G D   L +    +     ++ G 
Sbjct: 652  AVQ-VPGLTNLFVPPLRNRIDMLATGIKSPIGIKVLGPDPSTLQEVTDRIETVARQVPGV 710

Query: 715  AEVKVEQTTGLPMLTVNIDRNKTARYGLNVGDVQEAISIAVGGREAGTLFDGDRRFDIIV 774
                 E+      + V I R   ARYGL    VQ+ ++  VGG   G   +G  R+ I++
Sbjct: 711  GSAIAERAASGRYVDVRIRRVDAARYGLTQQQVQQLVATVVGGDSIGQTVEGRERYPIVL 770

Query: 775  RLPENLRTDLEAIKRLPVALPKGAGAEGARTSFIPLGEVATLDIAPGPNQVSREDGKRRI 834
            R P   R  L A+K LP+    GA         + L +VA + +  GP Q+  E+G+   
Sbjct: 771  RYPRAERDSLAALKVLPIVAANGAQ--------LTLAQVADIKVVAGPPQLKSENGQLAS 822

Query: 835  VVSANVRGRDLGSFVAEAEEAM-RNVKIPTGYWTVWGGQYENLASATQRLQVVVPVSLLL 893
             +  +  GRDLG+ VA+ + A+ R+VK+P G    W GQ+E L  A QRL +VVPV LL+
Sbjct: 823  YLYVDTAGRDLGTVVADLQRAVARDVKLPPGITVAWSGQFEYLEQAMQRLTLVVPVVLLI 882

Query: 894  VFTLLFAMFGNLKDGLLVFTGIPFALTGGIVALWMRGIPLSISAAVGFIALSGVAVLNGL 953
            VF L++A+F  + +  L+   +P AL GG+  +W+ G  +SI+  +GFIAL+GVA   G+
Sbjct: 883  VFVLIYAVFRRMSEAALIMASVPLALVGGLWLIWLLGHAVSIATMIGFIALAGVAAEFGV 942

Query: 954  VMISFIRNL---------REGGLPLDAAIREGALTRLRPVLMTALVASLGFVPMAIATGT 1004
            VM+ ++R+            G   LD AIREGA+ R+RP  MT  V   G  P+ +  G 
Sbjct: 943  VMMLYLRHAWDRQLAADPHSGPAELDEAIREGAVQRVRPKAMTVAVILAGLFPILLGHGA 1002

Query: 1005 GAEVQRPLATVVIGGILSSTALTLLVLPLLYRI 1037
            G+EV + +A  +IGG+L++  L++LV+P  +R+
Sbjct: 1003 GSEVMQRIAAPMIGGMLTAPLLSMLVIPAAFRV 1035



 Score = 30.8 bits (68), Expect = 5e-04
 Identities = 32/174 (18%), Positives = 71/174 (40%), Gaps = 17/174 (9%)

Query: 334  VLVDKAIATVKKNLFEGAVLVIAILFLFLGNIRAALITALVIPLSMLFTFTGMVNQKVSA 393
            ++V   I  V + + E A+++ ++    +G +    +    + ++ +  F  +       
Sbjct: 881  LIVFVLIYAVFRRMSEAALIMASVPLALVGGLWLIWLLGHAVSIATMIGFIALAGV---- 936

Query: 394  NLMSLGALDFGIIIDGAVVIVENCVRRLAHAQAHKGRPLTRSERFHEVFAASQEARRPLL 453
                  A +FG+++   ++ + +   R   A  H G P    E   E    + +  RP  
Sbjct: 937  ------AAEFGVVM---MLYLRHAWDRQLAADPHSG-PAELDEAIRE---GAVQRVRPKA 983

Query: 454  FGQLIIMIVYLPIFALTGVEGKLFHPMAFTVVIALLGAMILSITFIPAAVALFI 507
                +I+    PI    G   ++   +A  ++  +L A +LS+  IPAA  + +
Sbjct: 984  MTVAVILAGLFPILLGHGAGSEVMQRIAAPMIGGMLTAPLLSMLVIPAAFRVLV 1037