Pairwise Alignments

Query, 1070 a.a., Cobalt/zinc/cadmium efflux RND transporter, transmembrane protein CzcA from Variovorax sp. SCN45

Subject, 1052 a.a., probable copper efflux transporter, CzcA family from Pseudomonas putida KT2440

 Score =  636 bits (1640), Expect = 0.0
 Identities = 376/1059 (35%), Positives = 601/1059 (56%), Gaps = 37/1059 (3%)

Query: 1    MFERIIRFSIEQRWLILLAVLGMAALGIFSYQKLPIDAVPDITNVQVQINTAAPGYSPLE 60
            M E++IR+S+  R L+LLA L + A GIFS + LPIDA+PD+++ QV I T+ PG +P  
Sbjct: 1    MIEKLIRWSVSNRMLVLLATLFLMAWGIFSLRSLPIDALPDLSDAQVIIRTSYPGQAPQI 60

Query: 61   TEQRVTYPIETVMAGLPGLQQTRSLSRYGLSQVTVIFKDGTDIYFARQLVNERIQSARES 120
             E +VTYP+ T M  +PG +  R  S +G S V VIF+DGTD+Y+AR  V E +   +  
Sbjct: 61   VENQVTYPLTTTMLSVPGAKTVRGFSAFGDSFVYVIFEDGTDLYWARSRVLEYLSQVQSR 120

Query: 121  MPRGISPVIGPISTGLGEIYLWTVEAEEGARKADGKPYSSTDLREIQDWIIKPQLRNVAG 180
            +P    P +GP +TG+G IY + +    G        +    LR +QDW ++ +L+ V  
Sbjct: 121  LPATAKPALGPDATGVGWIYQYALVDRSGR-------HDLAQLRSLQDWFLRFELKTVPD 173

Query: 181  VTEINSIGGYAKEFQISPDPAKLLAHGLTMTDLVTALERNNANVGAGYIEKRGEQYLIRA 240
            V E+ SIGG  K++Q+  DP ++ + G+T  ++  A+ + N   G G +E+   ++++RA
Sbjct: 174  VAEVASIGGMVKQYQVVLDPLRMASLGITQGEVANAIGKANQETGGGVLEQGEAEFMVRA 233

Query: 241  PGQVKSVEDIGNVILG-NANGIPLRVQDVAEVGIGKELRTGAATDNGR-EVVLGTVFMLI 298
             G +K+++D   + L   ANG P+ + DVA V +G E R G    +G  E V G V +  
Sbjct: 234  SGYLKTLDDFRAIPLRLAANGAPVMLGDVARVQLGPEARRGIGELDGEGEAVGGVVILRS 293

Query: 299  GENSRTVSQAVDRKMQEINRTLPAGVKAVTVYDRTVLVDKAIATVKKNLFEGAVLVIAIL 358
            G+N+R     V  K++ + ++LPAGV+ VT YDR+ L+D+A+  +   L E  ++V  + 
Sbjct: 294  GKNAREAITHVKDKLETLKKSLPAGVELVTTYDRSQLIDRAVDNLSHKLIEEFIVVALVC 353

Query: 359  FLFLGNIRAALITALVIPLSMLFTFTGMVNQKVSANLMSLG--ALDFGIIIDGAVVIVEN 416
              FL ++R++L+  + +P+ +L     M +Q ++AN+MSLG  A+  G ++D AVV++EN
Sbjct: 354  AAFLWHLRSSLVAIVSLPVGVLIALIIMRHQGINANIMSLGGIAIAIGAMVDAAVVMIEN 413

Query: 417  CVRRLA--HAQAHKGRPLTRSERFHEVFAASQEARRPLLFGQLIIMIVYLPIFALTGVEG 474
              +R+   HA+ + G+ L  +E +  +  A+ E    L F  +II + ++P+F L   EG
Sbjct: 414  AHKRVEAWHAR-YPGQVLRGAEHWRVMTDAAVEVGPALFFSLMIITLSFVPVFTLQAQEG 472

Query: 475  KLFHPMAFTVVIALLGAMILSITFIPAAVALFI-GNKVSEKENRLMVWAKRGYEPLLARV 533
            +LF P+AFT   A+  A  L++T +P  +  +I G   +E+ N L     R Y P L  V
Sbjct: 473  RLFAPLAFTKTYAMAAAAGLAVTLVPVLMGYWIRGPLPAEERNPLNRGLIRVYRPALEVV 532

Query: 534  MGAKPLVITTAVVAVLLSGLL-ATRLGTEFVPSLSEGDFAIQALRIPGTSLTQSVEMQKQ 592
            +  +P +     +A+LLS L   + LG EF+P L EGD       +PG S  ++ E+ ++
Sbjct: 533  L-RRPWMTLLGALAILLSSLWPLSHLGGEFLPPLDEGDLLYMPSALPGLSAQKASELLQR 591

Query: 593  LERTLKEKFPEIERIFARTGTAEIASDPMPPNISDGYIMLKPESEWPKPRRSRAEVLAAV 652
             +R ++   PE+  +F + G AE A+DP P  + +  + LKP+ +W +P  S +E L   
Sbjct: 592  TDRLIR-TVPEVASVFGKAGRAESATDPAPLEMFETIVRLKPKDQW-RPGMS-SEKLVEE 648

Query: 653  QEEVEKLPGNNYEFSQPIQLRFNELISGVRSDVAVKIFGDDMDVLNKTAAEVSEALGKIA 712
             +   ++PG    +  PI+ R + L +G++S + VK+ G D+  ++ T   +      + 
Sbjct: 649  LDRTVRVPGLTNIWIPPIRNRIDMLATGIKSPIGVKVAGSDLAQIDHTTLAIERVAKSVP 708

Query: 713  GAAEVKVEQTTGLPMLTVNIDRNKTARYGLNVGDVQEAISIAVGGREAGTLFDGDRRFDI 772
            G      E+ TG   + ++IDR   ARYGLN+ DVQ  ++ A+GG   G   +G  R+ I
Sbjct: 709  GVTSALAERLTGGRYVDLDIDRQAAARYGLNIADVQAIVAGAIGGETIGETVEGLARYPI 768

Query: 773  IVRLPENLRTDLEAIKRLPVALPKGAGAEGARTSFIPLGEVATLDIAPGPNQVSREDGKR 832
             VR P   R  ++A+++LPV   +G          I LG VA + IA GP  +  E+ + 
Sbjct: 769  SVRYPREWRDSVDALRQLPVYTAQGGQ--------ITLGTVARVGIAEGPPMLKSENARP 820

Query: 833  RIVVSANVRGRDLGSFVAEAEEAM-RNVKIPTGYWTVWGGQYENLASATQRLQVVVPVSL 891
               V  +VRGRDL S VA+   A+ R VK+  G    + GQ+E L  A  RL  VVP +L
Sbjct: 821  SGWVYIDVRGRDLSSVVADLRRAVDREVKLNPGMSLSYSGQFEYLERANARLAWVVPATL 880

Query: 892  LLVFTLLFAMFGNLKDGLLVFTGIPFALTGGIVALWMRGIPLSISAAVGFIALSGVAVLN 951
             ++F LL+  FG + + LL+   +PFALTGG+  L++ G  LS++  VGFIAL+GVA   
Sbjct: 881  AIIFVLLYLTFGRMGEALLIMGTLPFALTGGVWLLYLMGFNLSVATGVGFIALAGVAAEF 940

Query: 952  GLVMISFIRNL---REGGL-----PLDAAIREGALTRLRPVLMTALVASLGFVPMAIATG 1003
            G++M+ ++ N    R+         L  AIREGA+ R+RP  MT  V   G +P+  + G
Sbjct: 941  GVIMLIYLNNAWAERQANSEHTQDALLEAIREGAVQRIRPKAMTVAVIVAGLLPILWSNG 1000

Query: 1004 TGAEVQRPLATVVIGGILSSTALTLLVLPLLYRIAHRRD 1042
            TG+EV   +A  ++GG+L++  L+L V+P  Y +  RRD
Sbjct: 1001 TGSEVMSRIAVPMVGGMLTAPLLSLFVIPAAYWLVRRRD 1039