Pairwise Alignments

Query, 454 a.a., Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC from Variovorax sp. SCN45

Subject, 477 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score = 70.9 bits (172), Expect = 9e-17
 Identities = 101/417 (24%), Positives = 162/417 (38%), Gaps = 51/417 (12%)

Query: 57  LRSAVAMALRANPGLAAASREQDATEAAIVQA--GAWPNPTLDAQLEDLR---------- 104
           L S    A+  N  LAAA  +  A    + QA  G  PN +  A++ + R          
Sbjct: 32  LVSVYQEAVDNNADLAAARADYGARREVVPQARAGLLPNLSAGAEMMNTRTKLDEPSITS 91

Query: 105 -RDNRTTTLQLSQPIELGGKRAARVTAAERARDQAASALAGRRAEIRASTITAFFDVLTA 163
            R   + +  L+QPI     R  ++ AAE   +QAA  L+     +   T   +F VL A
Sbjct: 92  NRSGNSWSATLAQPI-FRADRWFQLQAAEAVNEQAALELSATEQNLILQTAQNYFAVLRA 150

Query: 164 QERLRLAQDSVGLAQTATRAATNRVAAGKVSPLEETRARVAEAGTRVELLQAEGTLRSAR 223
           Q+ L   +      +     +  R   G     +  +++ +    R   + AE  ++ A 
Sbjct: 151 QDNLAATKAEEAAFKRQLDQSNERFDVGLSDKTDVLQSQASYDTARANRIIAERQVQDAF 210

Query: 224 QQLAALWGNPDPRFTQVEGAVDQLPAMAPAQN-----------LGVRLAAAPVVVQARLE 272
           + L  L       +T ++G V  LP   P  N             + L A    V A  E
Sbjct: 211 EALVTLTNR---EYTSIQGVVHSLPVQVPTPNDAKAWVETAGRQNLNLLATNYAVSAAEE 267

Query: 273 VERRKALSDLEQ----AKRIPDVTVSLGAKRVPASDGEVGGSRRNQVVVGLSVPLPIFDT 328
             R++           AK       SLG    P+  G        Q  VGL + +PI+  
Sbjct: 268 TLRQRKAGHAPTLDAVAKYQKGDNDSLGFTN-PSQLGVRYSGDVEQTSVGLQLNIPIYS- 325

Query: 329 NRGNVAEALSREEKARDDLAAAELQ---LGTEVAQATERL-RSARATAETLQ--HDALPG 382
             G +  +  RE   R  L+ +E Q   L  +V + T  L R+     E +Q    ++  
Sbjct: 326 --GGLTSSQVREAYQR--LSQSEQQRESLRRQVVENTRNLHRAVNTDVEQVQARKQSIIS 381

Query: 383 AETAYKAATKGFELGKFSFLEALDAQRTLF-------QVRAQYLLSLADAHRAAGEL 432
            ++A +A   G+++G  + ++ LDAQR L+         R  Y+L      +AAG L
Sbjct: 382 NQSALEATEIGYQVGTRNIVDVLDAQRQLYTSVRDYNNSRYDYILDNLSLKQAAGTL 438