Pairwise Alignments

Query, 454 a.a., Cobalt/zinc/cadmium efflux RND transporter, outer membrane protein CzcC from Variovorax sp. SCN45

Subject, 452 a.a., putative Outer membrane efflux protein from Pseudomonas putida KT2440

 Score = 70.5 bits (171), Expect = 1e-16
 Identities = 97/415 (23%), Positives = 167/415 (40%), Gaps = 43/415 (10%)

Query: 52  AGPLTLRSAVAMALRANPGLAAASREQDA--TEAAIVQAGAWPNPTLDA----------- 98
           A  + L+ A  +     P   AA  E+ A     AI +AG  P     A           
Sbjct: 27  ASAMDLKQAWDLLQYQGPIYRAAVHEKQAGGENRAIGEAGLLPQINASAYFNQVNGSQRQ 86

Query: 99  --QLEDLRRDNRTTTLQLSQPIELGGKRAARVTAAERARDQAASALAGRRAEIRASTITA 156
             Q  DL  D++   ++L QP+    ++ A     ++  D + +    +  +       A
Sbjct: 87  NGQDNDLDYDSKGANVRLRQPL-FNKQKMAEYRQGQQRADYSVAVFDAKSQDAAVRLADA 145

Query: 157 FFDVLTAQERLRLAQDSVGLAQTATRAATNR--VAAGKVSPLEETRAR--VAEAGTRVEL 212
           +FDVL A E + LA+  +   +    +A  R  + AG ++ ++E+ AR  +AEA    +L
Sbjct: 146 YFDVLLASETITLAKAKLSAFEEQLASAKRRMELGAGTITDVDESVARRDLAEA----DL 201

Query: 213 LQAEGTLRSARQQLAALWGNPDPRFTQVEGAVDQLPAM-APAQNLGVRLAAAPVVVQARL 271
           + A+  L +AR++L    G      T ++      P M    Q   V+  A   ++ AR 
Sbjct: 202 IDAQDNLVNARRKLEEYIGETPQALTTLQAGFSTPPLMPGNLQEWLVKAQADSPLIHARR 261

Query: 272 EVERRKALSDLEQAKRIPDVTVSLGAKRVPASDGEVG--GSRRNQVVVGLSVPLPIFDTN 329
                 A  ++ +A+     T+   A     S   +     R +   +GL + +P++   
Sbjct: 262 H-SYALAEEEVNRARSGHYPTLDFVAGYTAGSSQSISELNQRNHYSSIGLELNIPLYS-- 318

Query: 330 RGNVAEALSREEKARDDLAAAELQLGTE--VAQATERLRSARATAETLQ--HDALPGAET 385
            G    ALSR+  A    A  EL    +  ++  T   R  ++ A  +Q    A+   E 
Sbjct: 319 -GGSTSALSRQASANSSKALDELDATRQEVISNTTREYRGVQSGALRIQALEKAVASNER 377

Query: 386 AYKAATKGFELGKFS----FLEA----LDAQRTLFQVRAQYLLSLADAHRAAGEL 432
           +  +  KGF+ G  S     L A     DA+  LF+ +  YL+S      + G L
Sbjct: 378 SLTSTRKGFKEGGTSTNSDVLNAEELLYDARHDLFEAKLNYLMSRLRLASSVGSL 432