Pairwise Alignments

Query, 442 a.a., Copper sensory histidine kinase CusS from Variovorax sp. SCN45

Subject, 469 a.a., copper sensor protein from Pseudomonas putida KT2440

 Score =  202 bits (514), Expect = 2e-56
 Identities = 137/450 (30%), Positives = 230/450 (51%), Gaps = 24/450 (5%)

Query: 10  SIQSRLSLWIAAQTLFGLSVICLAIYLVTAWNFDQKQEEELDHKAVLVQHLLKEAEKGGN 69
           S+  RL+L I    +  L V  ++  +++  +F    E+ L  K    +H+L     G  
Sbjct: 7   SLVKRLTLMIMFAVIAVLVVAGISFNMLSQHHFRMLDEQALSEKLESTRHILSIQAPGTG 66

Query: 70  LPFLRHKLDDFFSMQDDVTLSI-SHAGQTLFQSTPAVG--GIWMLRDIEVPWTQGDT--- 123
           +  LR +L        D+T  I +  G+ LF    AV     +   D E  W   D    
Sbjct: 67  MEELRPQLRALLGAHQDLTAEILTSEGEVLFSDLKAVQIPDKYKRADKEEMWEWQDESHN 126

Query: 124 ----TTQLSVQ---------IGVNTAQEARLLRRLA-WTLLGAVVLGTALVSFTGMWLVR 169
               TT + +Q         + ++    A     L  W  +G V+  +ALVS    WLV 
Sbjct: 127 FRGITTDVEIQGQPAPGTVMLMLDITSHAHFFETLQRWFAIGLVI--SALVSAGIGWLVA 184

Query: 170 R-GLRPLKRLAESTAAMAPDKANRPIDAMGFAEELRPWITQFNALLLRVQRAYVQLESFN 228
           + GLRP++++ +   +++       I       EL+  I  FN +L R++ A+V+L +F+
Sbjct: 185 KSGLRPVEQITKVATSISARSLQERIPLEPVPLELQTLILSFNGMLARLEDAFVRLSNFS 244

Query: 229 ADVAHELRTPLANLIGSTELALTRQRSNEELQAVLASNLEEIGRLSGIVTDMLFLSQAER 288
           AD+AHELRTP++NL+  TE+ LTR+R  +  +  L SNLE++ R+S ++ DMLFL++++ 
Sbjct: 245 ADIAHELRTPVSNLLTHTEVVLTRKRDVDAYEENLYSNLEDLKRMSRMIDDMLFLAKSDN 304

Query: 289 GTPMRTRAVTSLAVQAADVIDFYDAMLEEAGLRAEVTGDAMADVDTALIRRALFNLLGNA 348
           G  +  +    L    + + ++Y  + ++ G+R  + G  +   D  +I RA+ N+L NA
Sbjct: 305 GLIIPEQVDIQLHDLVSKLFEYYQLLADDRGIRLTLQGKGVISGDRLMIDRAVSNILSNA 364

Query: 349 IRFATPASVIRIEIGQDSGEFTVAVVNRGEPIDPAALPRLFERFYRAAQA-RDGSTRHHG 407
           +R+    S I +EI Q + + T+ + N G  IDP  + ++F+RFYRA  A R+G   + G
Sbjct: 365 VRYTPDGSGISVEIQQAADKVTLTIKNGGATIDPQHINKIFDRFYRADPARREGGPSNAG 424

Query: 408 LGLSIVEAIARMHGGRVFAASQGGETRIGF 437
           LGL+I  +I + H G+V+  S  G T   F
Sbjct: 425 LGLAITRSIVKAHDGKVWCTSSEGVTAFNF 454