Pairwise Alignments

Query, 403 a.a., putative membrane protein from Variovorax sp. SCN45

Subject, 389 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  309 bits (792), Expect = 8e-89
 Identities = 179/381 (46%), Positives = 218/381 (57%), Gaps = 2/381 (0%)

Query: 14  VDALRGFALLGILVVNIATFASPFYGMGVPDPMAQSAAERAALFMRSFLFETKFYLLFSF 73
           VDALRGFAL GIL VNI  FA P+Y   + +P      +    F+ S LFETKFYLLFSF
Sbjct: 9   VDALRGFALFGILAVNICAFADPYYASTLSNPDYAGTVDHVVRFVISLLFETKFYLLFSF 68

Query: 74  LFGYSFTLQMDSAERDGKAFAPRMLRRLLGLWVLGLLHAVVLYHGDILTTYAAIGGVLLL 133
           LFGYSFTLQM +AER   AFAPRM+RR L L  LGL H   LY+G+IL+TYA +G VLL 
Sbjct: 69  LFGYSFTLQMAAAERANAAFAPRMVRRQLALLALGLAHGAALYYGEILSTYALLGLVLLA 128

Query: 134 LRRRGDGFMAFCAVALVLVTSLLWASLGYLMTRAGIDADTRSLHAEAMAALHAYRGTPAT 193
            R           + LV+     W  LG L    G      S   +A   L A+ G+   
Sbjct: 129 ARNLSPAKAYRWGICLVVTACSAWMLLGVLQALEGNLTGVSS--PDAADKLVAFTGSAVD 186

Query: 194 VIAQHLRELAQVWVVLALAQAPTALAMFLAGFIAGRRGLLANAAAHRTLFKRLVICGLLI 253
            +  H   L      L L Q P+ALAMF  G+ AGRR LL +  A +    RL++  L  
Sbjct: 187 TLRFHSGHLWSTVQALWLLQGPSALAMFFFGYAAGRRQLLVSPYAWQPRLSRLLLITLPA 246

Query: 254 GLPGAVVYGLSTMRVGDGGREVVGFGLGLLTAPFLTAAYASALLLFFQTPRGQGLVAWLA 313
           GL GA++Y LS      GG E   FG+G LTAP L+AAYA  +L  F +  G  L  WLA
Sbjct: 247 GLLGAMIYALSAAYAPGGGLETFAFGVGQLTAPLLSAAYALLMLALFSSAAGPWLCHWLA 306

Query: 314 PAGRMALSNYLLQSLVCAWIFLAYGLRLIGSVGPLGGFAFAFSIFAAQLVLSRWWMGRFA 373
           P G+MALSNYLLQS++   +F  YG  LI ++ PL     A  IFA QL LS  W+    
Sbjct: 307 PVGKMALSNYLLQSVLLGLLFSGYGAGLINTLAPLLMLPVALGIFALQLWLSARWLRTHP 366

Query: 374 YGPVEWLLRAFTLLEWPSMRK 394
           YGP+EWLLRA TL  WP+ R+
Sbjct: 367 YGPMEWLLRAATLWAWPNWRR 387