Pairwise Alignments

Query, 309 a.a., Pca operon transcriptional activator PcaQ from Variovorax sp. SCN45

Subject, 344 a.a., Chromosome initiation inhibitor from Variovorax sp. SCN45

 Score = 95.9 bits (237), Expect = 1e-24
 Identities = 81/289 (28%), Positives = 143/289 (49%), Gaps = 7/289 (2%)

Query: 1   MSAMNFAR-LKLRHLQCLVMVAQERNLVRAAKALSLTQPAVSKTVAELEEIIGRPLLLRR 59
           +  +++AR +K+RHL+  +++ +   L  AA  L +TQ A+S  ++ELE + G PL++R 
Sbjct: 5   LEGLSWARSIKVRHLESFLVLDEAGTLTEAAARLHMTQSAMSHWLSELERVAGTPLVVRG 64

Query: 60  RRGVELTPAAEVLVRHAVSALRGLSEGLGLAMDMPEADQL-HVAVGALPNMVANLLPEAV 118
           R+ V+LTPA  +L R A++ L  ++   G  M    A ++  + VG++   +A  LPEAV
Sbjct: 65  RK-VQLTPAGHLLKRLALTVLGDIAR-TGREMHAVAAGRVPRLNVGSVWAGIAGGLPEAV 122

Query: 119 ALLHASHPALRVRVVSGINAQLMTQLRQGEIDLVLGRLAQASAMADLAFEHLYSEPLLLV 178
           +     H  + V    G    L+  L    +D V+G L   +    LA + L+ + + +V
Sbjct: 123 SAFQQLHADVTVSFHDGPFDNLLKGLETRAMDAVIGVLDARAHQPQLAHQVLFEDRVSIV 182

Query: 179 VRPG--HPLASRRKPALDALAGYPLVLPVSGSLIRHTADAFLIAQGVALPNRLVEATDTS 236
           +  G  H  +++     D L     V+P SG+L R   DA+LI Q  +      E    +
Sbjct: 183 IGQGSRHWDSNQALSFADTL-HEKWVMPPSGTLTRIQLDAYLIEQQASWLVPKAETASLA 241

Query: 237 FAIGLLQRSEAVWFAPQGAVEGFLARGELKRVAIDTASTEGPVGLTVRR 285
               LLQ+ + V        +   + G  +++A+D+    GP+ +   R
Sbjct: 242 MMQALLQKGDYVGVCSGSMADYMASLGLFRKLAVDSDIRFGPITVVWNR 290