Pairwise Alignments

Query, 309 a.a., Pca operon transcriptional activator PcaQ from Variovorax sp. SCN45

Subject, 318 a.a., no description from Variovorax sp. SCN45

 Score =  120 bits (300), Expect = 5e-32
 Identities = 90/287 (31%), Positives = 139/287 (48%), Gaps = 12/287 (4%)

Query: 2   SAMNFARL----KLRHLQCLVMVAQERNLVRAAKALSLTQPAVSKTVAELEEIIGRPLLL 57
           S++ +ARL    +LRHLQ LV +A    + RAA+ + ++QPA ++ +A++E ++G PL  
Sbjct: 8   SSVLYARLVAKGRLRHLQLLVSIADSGGVRRAAEQIGMSQPAATQALADIESLLGTPLFE 67

Query: 58  RRRRGVELTPAAEVLV---RHAVSALRGLSEGLGLAMDMPEADQLHVAVGALPNMVANLL 114
           R  RG+ LT     +V   R+ +SALR  ++ +  A+       L   VGA+P  V+ LL
Sbjct: 68  RHVRGMRLTAVGRAVVPMARNTLSALRASADTVH-ALQAGAGGVLR--VGAIPAAVSGLL 124

Query: 115 PEAVALLHASHPALRVRVVSGINAQLMTQLRQGEIDLVLGRLAQASAMADLAFEHLYSEP 174
              +    A HP LR+ VV     QLM  +  G +D+ L R   A   A  +FE L  + 
Sbjct: 125 CRMLPSFSARHPDLRIEVVEATGEQLMADVMSGRVDMALCR-RPAEMPAPCSFEALAPDV 183

Query: 175 LLLVVRPGHPLASRRKPALDALAGYPLVLPVSGSLIRHTADAFLIAQGVALPN-RLVEAT 233
             +V    HPLA + KP L  L      LPV G  +R   DA   A     P    + +T
Sbjct: 184 PWIVAGRRHPLARKAKPTLADLRAAHWALPVHGIGVRDIFDALFEAPDAPKPALHSISST 243

Query: 234 DTSFAIGLLQRSEAVWFAPQGAVEGFLARGELKRVAIDTASTEGPVG 280
                + +L+    +   P+  +  F+  G + RVA +  S    +G
Sbjct: 244 SLPLVLEILRGDRVLSMVPRSLIAPFVQWGLVARVAFELDSEFEGIG 290