Pairwise Alignments

Query, 309 a.a., Pca operon transcriptional activator PcaQ from Variovorax sp. SCN45

Subject, 397 a.a., HTH-type transcriptional regulator GalR from Pseudomonas putida KT2440

 Score =  123 bits (308), Expect = 8e-33
 Identities = 96/299 (32%), Positives = 145/299 (48%), Gaps = 7/299 (2%)

Query: 12  RHLQCLVMVAQERNLVRAAKALSLTQPAVSKTVAELEEIIGRPLLLRRRRGVELTPAAEV 71
           R LQ  V + + R++   A+   L+QPAVS  +  LE   G+PL +R  RG++ T A+  
Sbjct: 102 RRLQVFVKLCETRHMQTVARHFGLSQPAVSAALKVLEGGCGQPLFVRTSRGLQPTVASRD 161

Query: 72  L---VRHAVSALRGLSEGLGLAMDMPEADQLHVAVGALPNMVANLLPEAVALLHASHPAL 128
           +   +R A++ LR L   L  AM       +H  VGALP   + +LP+A+    A HP +
Sbjct: 162 ILFPIRRALNELRLLDSDLS-AMQGTLRGVVH--VGALPLGRSRILPDAILRFTAQHPQV 218

Query: 129 RVRVVSGINAQLMTQLRQGEIDLVLGRLAQASAMADLAFEHLYSEPLLLVVRPGHPLASR 188
           RV         L T+LR G++D VLG L      +DL  E L +E ++++ R GHPL   
Sbjct: 219 RVVTNESPFDLLATELRVGDVDFVLGALRPHDYASDLVGEPLINEEMVVLARRGHPLLHT 278

Query: 189 RKPALDALAGYPLVLPVSGSLIRHTADAFLIAQGVALPNRLVEATDTSFAIGLLQRSEAV 248
               L  +     VLP +GS  R   D    A G+  P  +VE+ D +   GLL RS+ +
Sbjct: 279 HL-TLKGVHQARWVLPRAGSPARQLLDNCFAAAGLTAPWPVVESADLAVIRGLLVRSDML 337

Query: 249 WFAPQGAVEGFLARGELKRVAIDTASTEGPVGLTVRRNSEPGEGARLLMETIHGIVQKR 307
                  +   +A GEL+R+ +    T   +GL  R        A  LM  I  ++ ++
Sbjct: 338 AAVSAHQLAYEIASGELQRLPLALPGTARAIGLMQRSGCLQSPAAVALMACIRQVITEQ 396