Pairwise Alignments

Query, 170 a.a., KEGG: RNA polymerase sigma-70 factor, ECF subfamily from Variovorax sp. SCN45

Subject, 170 a.a., RNA polymerase sigma-70 factor, ECF subfamily from Pseudomonas putida KT2440

 Score =  164 bits (414), Expect = 9e-46
 Identities = 78/158 (49%), Positives = 113/158 (71%)

Query: 5   AATAPIDALYREHRDWLQGWLRRRLGDGHTAADLTQDTFVRVISGGQAQAIQEPRAYLTT 64
           A T+ ++ LY  H +WL GWLRRRLG  H+AADL QDT++R++   +A  + EPRA+L T
Sbjct: 10  ALTSTVEGLYHAHHNWLTGWLRRRLGCPHSAADLAQDTYMRLLQAREAPQLVEPRAFLAT 69

Query: 65  LAQRVLYNFWRRRELERAWLDALAAQPQELAPSPETYALVREAVETIDRWLDGLPPKVRE 124
           +A+RVL N +RR+ELERA+L ALA  P+E+AP  E  A++ E +  +D  LDGLPP V+ 
Sbjct: 70  VAKRVLCNHFRRQELERAYLQALAQVPEEVAPCEEQKAIIFETLLALDHLLDGLPPLVKR 129

Query: 125 AFLLRRLEGLAHADIAVRMGISITSVERYVKQAIVHLY 162
           AFLL +++GL   +IA  +GIS+ +V+RY+ +A +  Y
Sbjct: 130 AFLLAQVDGLGQGEIARELGISLATVKRYLNKAAMRCY 167