Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 316 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  113 bits (282), Expect = 7e-30
 Identities = 98/315 (31%), Positives = 150/315 (47%), Gaps = 20/315 (6%)

Query: 15  EQAIDWLVRLDSGHSSDSDQQAFAQWLDAAPAHAAAWTNLQQRLNQRITPALSQLQAGGH 74
           ++A  W VRL     S +++Q F  W +  P H   +  LQ   +       ++LQA   
Sbjct: 7   DEAAQWFVRLQDAELSIAERQRFDAWRNEHPDHQYEFDVLQGLWSATGLLPKARLQA--- 63

Query: 75  ATPSMRALSAPGDHRPRRRALLGSAAVA--LLAATGGGIW--LDRRSPLMAWSSDLRTGT 130
                    AP + RP+RRA+L  A  A  +  A G G++  LD   P   +S++  TG 
Sbjct: 64  ------LCEAPVE-RPKRRAVLRYAVAAGVIAVALGLGLFSGLDHPKP---YSAEFSTGV 113

Query: 131 GERRRFALEDGSDLLLNARSSADLYFSSTQRLVRLRAGALIAQVAADALRPFVVQTAQGT 190
           GE R+ AL DGS + LN+R+   + +   +R V L+ G  +  V  D  RPFVV    G 
Sbjct: 114 GEHRQVALPDGSVMDLNSRTVVAVQYEKGRRGVELKQGEAMFSVEHDTSRPFVVAAGAGQ 173

Query: 191 VRALGTRFMVQQEEGRTLVSVLEHSVRLAPRDEGPGVALEQG-GSAWMRQDSVEAIFATR 249
           V   GTRF V+++EG+T V V   +V++        V L  G G+    + SV A +   
Sbjct: 174 VTVTGTRFDVRRDEGQTRVMVEAGTVKVQGDSPDNLVTLTAGLGTHVDNKGSVAAAYTVN 233

Query: 250 VDP-SAWSSGVLEVHDQPLSEVVDALRPYTPAVLRVSAEA-ARVRVFGVYPLDRPMQVLQ 307
            +  +AW +G L  ++  L EV   +  Y    LRVS  A   +R+  V+  +    +L+
Sbjct: 234 TEELTAWRTGKLVFNNALLGEVAREVSRYRERPLRVSTPAVGNLRLTSVFKANDTDALLK 293

Query: 308 DLVDTLPLRVRRWGD 322
            L   LP+ +R   D
Sbjct: 294 ALPHILPVALRTLPD 308