Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 313 a.a., membrane protein from Pseudomonas simiae WCS417

 Score =  126 bits (317), Expect = 6e-34
 Identities = 97/310 (31%), Positives = 151/310 (48%), Gaps = 16/310 (5%)

Query: 13  VTEQAIDWLVRLDSGHSSDSDQQAFAQWLDAAPAHAAAWTNLQQRLNQRITPALSQLQAG 72
           V EQA+ WLV +  G  +   Q A+ QWL+A   H  AW ++Q R+NQR+    S L   
Sbjct: 7   VAEQAVHWLVEMQHGALNPRQQAAWQQWLNAHSEHQRAWDHMQ-RVNQRLRGMPSPL--- 62

Query: 73  GHATPSMRALSAPGDHRPRRRALLGSAAVALLAATGGGIWLDRRSPLMA-WSSDLRTGTG 131
            HA     AL+AP     RR+AL     + +L A     W  R+  ++   ++D R+  G
Sbjct: 63  AHA-----ALNAPTS-TSRRQAL---KLLLILGAGSAAAWSLRQQHILPPLTADYRSPVG 113

Query: 132 ERRRFALEDGSDLLLNARSSADLYFSSTQRLVRLRAGALIAQVAADALRPFVVQTAQGTV 191
           +RR+  L DGS L LN  S+ D++F   QRL+RL  G ++    A A  P  V T QG +
Sbjct: 114 QRRKVQLADGSQLQLNTGSAVDVHFDGRQRLIRLLEGEILLTGHA-AGTPLQVLTGQGLL 172

Query: 192 RALGTRFMVQQEEGRTLVSVLEHSVRLAPRD-EGPGVALEQGGSAWMRQDSVEAIFATRV 250
            +   R  V+Q    T ++VL+  V + P    G  +A++        +   +    T  
Sbjct: 173 TSQAARMNVRQFNDHTQLAVLDGRVEVMPTTYSGLPLAVDATRQVNFTRKGWDTPRPTDA 232

Query: 251 DPSAWSSGVLEVHDQPLSEVVDALRPYTPAVLRVSAEAARVRVFGVYPLDRPMQVLQDLV 310
           +  AW+ G+L      L + +  L  Y    +    + A + + G YPLD   ++L  L 
Sbjct: 233 NSGAWADGMLVAAHMRLEDFLGELGRYRRGQVNCDPQVANLLISGSYPLDDSERILDLLE 292

Query: 311 DTLPLRVRRW 320
            +LP++VRR+
Sbjct: 293 VSLPVKVRRF 302