Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 332 a.a., Sigma factor regulator VreR (cytoplasmic membrane-localized) of trans-envelope signaling system from Variovorax sp. SCN45

 Score =  114 bits (284), Expect = 4e-30
 Identities = 95/276 (34%), Positives = 136/276 (49%), Gaps = 21/276 (7%)

Query: 16  QAIDWLVRLDSGHSSDSDQQAFAQWLDAAPAHAAAWTNLQQRLNQRITPALSQ---LQAG 72
           QA  W VRL SG ++ +D  AF +W+  + AHA AW  +  R    + P L++    QA 
Sbjct: 16  QAEAWWVRLHSGRATRADADAFREWVTHSTAHAQAWREV-MRTWSALDPLLAEEAARQAS 74

Query: 73  GHATPSMRALSAP-GDHRPRRRALLGSAAVALLAATGGGIWLDRRSPLMAWSS------D 125
              T S+R LSA  G H P RRA LG A  A  + T G + LD   PL  W S      D
Sbjct: 75  RAGTLSLRGLSAALGLHSPGRRAFLGGAVAA--SVTAGVMALD--PPLGLWPSVGDLTAD 130

Query: 126 LRTGTGERRRFALEDGSDLLLNARSSAD-LYFSSTQRLVRLRAGALIAQVAADALRPFVV 184
            RT TGE+R+ AL  G  + +N ++  + +   ++ R + L AG   A++AA+    F+V
Sbjct: 131 YRTATGEQRQVALARGISVRMNTQTLINRIGADASPRGLVLVAGE--AEIAANGASDFLV 188

Query: 185 QTAQGTVRALGTRFMVQQEEGRTLVSVLEHSVRLAPRDEGPGVALEQGGS-AWMRQDSVE 243
           +T  G + A   RF ++    +  V+ L+   RL     G   ALE G    + R    E
Sbjct: 189 ETGGGRLVARSARFNIRHTGPQVCVTCLDG--RLTVSVNGEQRALEAGRQVTFDRAGLQE 246

Query: 244 AIFATRVDPSAWSSGVLEVHDQPLSEVVDALRPYTP 279
            + A     S W +GVL     PL+EV+D +  Y P
Sbjct: 247 VVRADEASVSTWRTGVLSFDRMPLAEVIDEINRYRP 282