Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 314 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  126 bits (316), Expect = 8e-34
 Identities = 103/305 (33%), Positives = 143/305 (46%), Gaps = 24/305 (7%)

Query: 17  AIDWLVRLDSGHSSDSDQQAFAQWLDAAPAHAAAWTNLQQRLNQRITPALSQLQAGGHAT 76
           A  WL  LDSG +S+SD Q  AQW  ++  H  AW               S L+A     
Sbjct: 15  AARWLALLDSGDASESDLQRLAQWRASSHLHEDAWQKA------------SLLRARFAGL 62

Query: 77  PSMRALSAPGDHRPRRRALLGSA--AVALLAATGGGIWL-DRRSPLMAWSSDLRTGTGER 133
           P   A++A       RRALL  A    ALL       WL  R  PL AW++D+RT  GER
Sbjct: 63  PGALAMAALDRPDAGRRALLKQALGVTALLPVA----WLVSRELPLDAWTADMRTAVGER 118

Query: 134 RRFALEDGSDLLLNARSSADLYFSSTQRLVRLRAGALIAQVAADALRPFVVQTAQGTVRA 193
           R+  L DG+ L LN  S+ D+   + +  V L  G +   V A+      +Q   G V  
Sbjct: 119 RQALLSDGTLLQLNTDSAVDIELGAGR--VALLRGEVAVSVPANL--SLTLQVPYGRVVL 174

Query: 194 LGTRFMVQQEEGRTLVSVLEHSVRLAPRDEGPGVALEQGGSAWMRQDSVEAIFATRVDPS 253
                 ++  +    VS ++ +V L P   GP V L+ G  A ++   V  + A      
Sbjct: 175 SEGEACLRLLDEACRVSAIKGAVSLQPL-RGPAVMLQDGQQASLQAAGVGPVKAFDAWQL 233

Query: 254 AWSSGVLEVHDQPLSEVVDALRPYTPAVLRVSAEAARVRVFGVYPLDRPMQVLQDLVDTL 313
            W  G L + D+PL E++  LR Y P VLR + E  R+RV G + LD   +VL  L  +L
Sbjct: 234 GWREGALRLDDRPLGELLHELRRYRPGVLRWAPELERLRVTGTFRLDDTDRVLALLAASL 293

Query: 314 PLRVR 318
           PL+V+
Sbjct: 294 PLQVQ 298