Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  134 bits (336), Expect = 4e-36
 Identities = 103/322 (31%), Positives = 150/322 (46%), Gaps = 21/322 (6%)

Query: 16  QAIDWLVRLDSGHSSDSDQQAFAQWLDAAPAHAAAWTNLQQRLN--QRI-TPALSQLQAG 72
           +A DWLV+L SG ++++D +A   W   +  HA AW   +  L   +R+ TP   +    
Sbjct: 13  EAADWLVQLQSGTATEADHRAVQAWCKRSAQHAQAWQRAEAILGDFRRLPTPVTGE---- 68

Query: 73  GHATPSMRALSAPGDHRPRRRALLGSAAVALLAATGGGIWLD-RRSPLMAWSSDLRTGTG 131
                ++R LS  G     RR  L    + LLAA     WL  R +P   W++D  T  G
Sbjct: 69  -----TLRRLSRNG--AVSRRQALHRLGLWLLAAPAA--WLAWRETPWQQWTADAHTAVG 119

Query: 132 ERRRFALEDGSDLLLNARSSADLYFSSTQRLVRLRAGALIAQVAAD---ALRPFVVQTAQ 188
           E+R   L DGS +LLN  ++ D+ F + QR + L AG ++   A D     RP  V+T  
Sbjct: 120 EQRTLTLADGSQVLLNTDTAIDITFDARQRRIDLLAGEILLTSAKDPATPARPLSVRTPH 179

Query: 189 GTVRALGTRFMVQQEEGRTLVSVLEHSVRLAPRDEGPGVALEQGGSAWMRQDSVEAIFAT 248
           G   A GTRF V+     T V+VLE +V   P      + L+ G  +    D V      
Sbjct: 180 GQATARGTRFSVRIHGPLTQVAVLEGAVDTRPL-HADSLLLKAGERSAFDGDRVLPASPL 238

Query: 249 RVDPSAWSSGVLEVHDQPLSEVVDALRPYTPAVLRVSAEAARVRVFGVYPLDRPMQVLQD 308
                AW  G+L   D  L++++  L  Y P VLR       ++V G +PL      L+ 
Sbjct: 239 ETGDLAWEHGMLLARDMRLADLLQELARYRPGVLRCHPAVRELKVSGAFPLADTDASLRL 298

Query: 309 LVDTLPLRVRRWGDLVVYVDVH 330
           L DTLP+ ++      V V+ H
Sbjct: 299 LSDTLPVNIQGMTRYWVTVEPH 320