Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 316 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  129 bits (325), Expect = 7e-35
 Identities = 104/314 (33%), Positives = 144/314 (45%), Gaps = 21/314 (6%)

Query: 9   PLDAVTEQAIDWLVRLDSGHSSDSDQQAFAQWLDAAPAHAAAWTNLQQRLNQRITPALSQ 68
           P  A  +QAIDWLV+L     S   +Q F  WL + P +  AW        QR++    +
Sbjct: 6   PAQAQVDQAIDWLVKLRFDTPSPRTEQQFQHWLASHPHNRLAW--------QRVSNLGDE 57

Query: 69  LQAGGHATPSMRALSAPGDHRPRRR---ALLGSAAVALLAATGGGIWLDRRSPL--MAWS 123
           L AG     S R L A    +  RR    LLG      L A GG +    R PL      
Sbjct: 58  L-AGLPKDLSRRTLDASQHPKASRRDHLKLLG------LLAVGGSLGWAAREPLGLPQLL 110

Query: 124 SDLRTGTGERRRFALEDGSDLLLNARSSADLYFSSTQRLVRLRAGALIAQVAADALRPFV 183
           +D  T TGERR++   DGS L LN  S+ DL++S+ QR ++L  G +  +   +  RPF 
Sbjct: 111 ADTSTATGERRQWQGSDGSRLQLNTASAIDLHYSAEQRQLKLIHGEVSLESNPNDNRPFH 170

Query: 184 VQTAQGTVRALGTRFMVQQEEGRTLVSVLEHSVRLAPRDEGPGVALEQGGSAWMRQDSVE 243
           V T  G +     + ++++     L+SV    V L P        L  G +  +  D   
Sbjct: 171 VATRVGPLTTFDGQLLLRENSQGLLLSVRRGEVTLFPASASARQVLP-GETLQVTADGSI 229

Query: 244 AIFATRVDPSAWSSGVLEVHDQPLSEVVDALRPYTPAVLRVSAEAARVRVFGVYPLDRPM 303
                  DP  W+ GVL V   PL+E    L  Y P +LR + E A ++V G Y L    
Sbjct: 230 QARTLHNDPWGWTEGVLSVQQMPLAEFASELGRYRPGLLRCAPEVAGLKVSGTYQLADTG 289

Query: 304 QVLQDLVDTLPLRV 317
           Q+LQ L  +LP+RV
Sbjct: 290 QILQLLTRSLPVRV 303