Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 321 a.a., putative Transmembrane sensor from Pseudomonas putida KT2440

 Score =  132 bits (331), Expect = 2e-35
 Identities = 104/317 (32%), Positives = 144/317 (45%), Gaps = 17/317 (5%)

Query: 9   PLD-AVTEQAIDWLVRLDSGHSSDSDQQAFAQWLDAAPAHAAAWTNLQQRLNQRITPALS 67
           PLD AV + A  W  RL + H+  + Q  +  WL+    H  AW+ ++  +NQR      
Sbjct: 5   PLDHAVLQAAAGWFARLHAAHNDAAIQAQWHAWLNEDTRHRLAWSYVEN-INQRFGGLSG 63

Query: 68  QLQAGGHATPSMRALSAPGDHRPRRRALLGSAAVALLAATGGGI-----WLDRRSPLMAW 122
           Q +       S+R        R  RRA+LGS  VA +A   G       W+D  SP  AW
Sbjct: 64  QAEQARQVFDSVRR------DRHSRRAVLGSLCVAGVAGVLGWGGWQRGWVD--SP-RAW 114

Query: 123 SSDLRTGTGERRRFALEDGSDLLLNARSSADLYFSSTQRLVRLRAGALIAQVAADALRPF 182
            +  RTG GE R   L DGS L LN  ++ D+ F    R +RL  G ++ +   D  RP 
Sbjct: 115 FATYRTGLGEVRPVTLADGSQLWLNGGTALDVQFDEGSRQLRLYRGEILIESGKDP-RPL 173

Query: 183 VVQTAQGTVRALGTRFMVQQEEGRTLVSVLEHSVRLAPRDEGPGVALEQGGSAWMRQDSV 242
            V T  G V+ LGTRF V+ +  +T +SV   +V+      G    L+ G         V
Sbjct: 174 SVVTRAGRVQPLGTRFSVRDQGLQTTLSVFAGAVQATCSGSGRQTTLQAGQMMVFDAQQV 233

Query: 243 EAIFATRVDPSAWSSGVLEVHDQPLSEVVDALRPYTPAVLRVSAEAARVRVFGVYPLDRP 302
            A    +     WS GVL   D PL +++D LR Y    L +      +R  G +PL   
Sbjct: 234 GAPSTAQRLREDWSRGVLVAEDMPLVQMIDILRDYRHGHLGIDPAIGSLRAVGTFPLLDT 293

Query: 303 MQVLQDLVDTLPLRVRR 319
            + L  L   LP+RV R
Sbjct: 294 DRALAMLERALPIRVVR 310