Pairwise Alignments

Query, 332 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 318 a.a., putative Transmembrane sensor protein from Pseudomonas putida KT2440

 Score =  144 bits (364), Expect = 2e-39
 Identities = 99/315 (31%), Positives = 151/315 (47%), Gaps = 14/315 (4%)

Query: 8   LPLDA-VTEQAIDWLVRLDSGHSSDSDQQAFAQWLDAAPAHAAAWTNLQQRLNQRITPAL 66
           LP+ + V E AI W + L     +  ++  F +W  A+  HA AW  L   ++QR++ A 
Sbjct: 4   LPVSSRVLEAAIAWKLSLGESSGTPDERNEFMRWHAASEEHARAWRQLGA-MDQRVSAA- 61

Query: 67  SQLQAGGHATPSMRALSAPGDHRPRRRALLGS--AAVALLAATGGGIWLDRRSPLMAWSS 124
                   A P+ +AL        RR   +G   A   LL A    +     +P   W +
Sbjct: 62  --------AGPARQALLQSRASLRRRIGKVGGGLAGTFLLGALLAWVGAPSLAPSY-WLA 112

Query: 125 DLRTGTGERRRFALEDGSDLLLNARSSADLYFSSTQRLVRLRAGALIAQVAADALRPFVV 184
           D RT TGE R   LEDG+ L LN  ++ D+ ++  QR++ L  G +  +      RP +V
Sbjct: 113 DQRTATGELRTLRLEDGTLLSLNTHTAVDIEYAGAQRVIVLHQGEISVETGHQDPRPLLV 172

Query: 185 QTAQGTVRALGTRFMVQQEEGRTLVSVLEHSVRLAPRDEGPGVALEQGGSAWMRQDSVEA 244
           +T  G +R LGTRF+V++E G T + VL+ SV   P D G    L +G    M  + +  
Sbjct: 173 RTEDGRLRPLGTRFLVRREAGGTRLEVLQASVAAMPHDSGDEQVLREGQQVLMNANGLGE 232

Query: 245 IFATRVDPSAWSSGVLEVHDQPLSEVVDALRPYTPAVLRVSAEAARVRVFGVYPLDRPMQ 304
           +        AW+ G+L V +  L +++  L  Y    L V A+ A +RV G +PL     
Sbjct: 233 VGTVPAGADAWTRGMLVVDNVRLGDLLATLGQYRSGYLGVDAKVADLRVTGSFPLTNTDL 292

Query: 305 VLQDLVDTLPLRVRR 319
            L  LV  LP+++ R
Sbjct: 293 ALASLVPALPVKIER 307