Pairwise Alignments

Query, 850 a.a., TonB-dependent siderophore receptor from Variovorax sp. SCN45

Subject, 811 a.a., ligand-gated channel from Pseudomonas simiae WCS417

 Score =  478 bits (1229), Expect = e-139
 Identities = 295/854 (34%), Positives = 453/854 (53%), Gaps = 58/854 (6%)

Query: 6   LSPISPARRKAGP--LLPTRKATLALAALLACGSTASFAQTPSAAPGATAATDGAMEWNL 63
           LSP+S A  +A    LLP+    LALA  L     A + Q               +E ++
Sbjct: 7   LSPLSKALTRALNINLLPS---ALALAVSLP---VAGYVQAQE------------IELDI 48

Query: 64  PADELGLVLARIARQGGRTISAAPSLVAGRRAQAVQGRFTVAQAAQQALTGSGLALAQTP 123
           PA  LG  L    RQ    +  +P+ VAG+ + A++G+    QA    L           
Sbjct: 49  PAQALGSALQEFGRQANLQVLYSPTDVAGKNSTAIKGKLDPQQAINTLL----------- 97

Query: 124 SGTLTVVASSGNA-SASATPEAAGTTLAEVRVTAQAERTGTTEGTGAYTARGPSTSATGL 182
           +GT T  + SGNA + +A   +AG  L+  +VT        TEG+G+YT  G   +AT L
Sbjct: 98  AGTSTTHSLSGNALTVTAAGASAGLELSPTQVTGNV-LGNITEGSGSYTP-GTIATATRL 155

Query: 183 GLSLKETPQSISVITQQRMEDENLTSIKQVLARTPGLSTSTLGTERTSASARGYPITNYQ 242
            L+ +ETPQSI+VIT+Q +ED  L ++  V+  TPG++ S   T+RT+  +RG+ + ++Q
Sbjct: 156 TLTPRETPQSITVITRQHIEDFGLNNVDDVMRHTPGITVSAYDTDRTNYYSRGFSVNSFQ 215

Query: 243 LDGISTHSEFLGLDALPSQSIADMALYDRIEVLRGASGLTTGAGDPSGIINMVRKKPTAS 302
            DGI +    +G  A    +++DMA+YDR+EVL+GA+GL  GAG     IN++RKKPT+ 
Sbjct: 216 YDGIPSTVRNVGYSA--GNTLSDMAIYDRVEVLKGATGLLNGAGSLGATINLIRKKPTSE 273

Query: 303 FQGLAEASVGSWGNRRGMLDISTPLNESGSVRGRMVAVHEEGNSYIDYYRKKKDVFYGVV 362
           F+G  +   GSW N R  +D+S PL +SG+VRGR VA +++  S++D+Y +K + +YG+ 
Sbjct: 274 FKGHVQLGAGSWDNYRSEVDVSGPLTDSGNVRGRAVAAYQDKKSFMDHYSRKTETYYGIT 333

Query: 363 EADLTSTLKLTAGIDHQENRSRGSLSYLGYPLFNSSGEQVDLPVSFSGASRDNRFNTNST 422
           E DL+    LT G D+Q+N  +GS     +PL NS+G    +P S++  +  + +  N+ 
Sbjct: 334 EFDLSPDTMLTVGFDYQDNIPKGSSWSGSFPLVNSNGSINKMPRSYNNGTTWSSWEQNTR 393

Query: 423 SGFLTLEQTLANDWKLKLSANYLQSKQREDSVYLAVNSSLFDKFTGDG-LNLNAERRDYD 481
           + F  LE  + + W  K      Q   + +S +  + S  F +   DG   +N ++   +
Sbjct: 394 TAFAMLEHDMGDGWVTK-----FQLDHKINSYHADLGSIQFVQPAADGTAEINGQKYTGE 448

Query: 482 LRNKTVDLKLTGPFTLFGRQHEAVIGADYTDFRSLTNGSFDISGLRNAPVNIYRWN-NAG 540
            ++ + DL  TGPF+LFGR+HE V+G      R    G +         V+ Y WN +  
Sbjct: 449 TKSTSADLYATGPFSLFGREHELVVGGSIGTSRWQGKGYWSPEWPGGNKVDFYNWNGHIA 508

Query: 541 TPVFGERFVTFDSTRRQKSIYGAGRFQLSDQFKLVVGGKLLNYDSDYITKTTDGYDSKSP 600
            P++G      D T RQ   Y   R  + D   +++GG++ NY   ++T     Y     
Sbjct: 509 KPIYGPVQQYIDDTIRQTGYYMTTRLNVMDDLHVILGGRVANY---HVTGINPSY----- 560

Query: 601 SSERRVFTPYAGLLYDLDENHTLYTSFATIYNPQSSI--DRYGALLDPQKGDTYEAGIKS 658
             E   F PYAG++YDL++N + Y S+  I+ PQ S   DR   LL+P +G  YE G+K 
Sbjct: 561 -KETGRFVPYAGVVYDLNDNISAYASYTDIFQPQESTYKDRNQKLLEPDEGQNYELGLKG 619

Query: 659 SFLGGRVTSSAAVYQIKQDNIAEADSGY--FVPGTTNTASRAIKGATTRGIDLELNGTLA 716
            FL GR+ +S A +++ + N A +D  Y    P  +N A +  K A T+G + E++G L+
Sbjct: 620 DFLDGRLNASVAYFEVHETNRAISDDAYNNQTPAPSNYAFKGSK-AVTKGYEAEVSGELS 678

Query: 717 RGWNVAASYNFSTSKDATGQRINTTFPRQMARLWTTYRLPGDWRRLTLGGGVDWSSGFYY 776
            GW V   Y     +D   ++I+T  P     L TTY+L GD  + T+GGG+ W S  +Y
Sbjct: 679 PGWQVQGGYTHKIVRDDNDKKISTFEPEHQVNLNTTYKLKGDLDQFTIGGGLRWQSKGWY 738

Query: 777 TGEAWQIERTVTARQGAYAVASLMARYDVNDQLSVTLNVQNLFDRKYISSVSGWWYSGTY 836
                 +       Q AY +  LM RY V   LS T+N  N+FD+ Y ++V G++ S  Y
Sbjct: 739 EIYNSPLNTNQDITQKAYWLVDLMTRYQVTKNLSATVNFNNIFDKSYYTNV-GFYNSAAY 797

Query: 837 GAPRNVQLTARYKF 850
           G PRNV  + R+ F
Sbjct: 798 GEPRNVMFSTRWDF 811