Pairwise Alignments

Query, 510 a.a., Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system from Variovorax sp. SCN45

Subject, 467 a.a., MFS transporter from Dickeya dianthicola ME23

 Score =  183 bits (465), Expect = 1e-50
 Identities = 126/408 (30%), Positives = 202/408 (49%), Gaps = 28/408 (6%)

Query: 25  MQALDTTIANVALPHMQGSLQASQDQITWVLTSYIVASAIALPLTGWLCGHWGRRRVFII 84
           MQALDTTI N ALP M  SL  S  ++  V+ +Y++  A+ LP +GWL    G R +F  
Sbjct: 21  MQALDTTIVNTALPSMAVSLNESPLRMHAVIVAYVLTVAMLLPASGWLADRLGVRNIFFS 80

Query: 85  SVIGFTVASALCGLATSLVGIVAARLLQGIFGAALVPLSQAVLLDINPREKVGQAMAIWG 144
           +++ F++ S LC  +T+L  ++ +R+LQGI GA +VP+ +  ++ + PR++   AM    
Sbjct: 81  AILLFSLGSLLCARSTTLNELLLSRVLQGIGGAMMVPIGRLTVMKLVPRDRYMAAMTFVT 140

Query: 145 AGIMVGPILGPLLGGWLTENFDWRWVFFINLPVGIFAFWGIARYLPESRPQGEKLDIFGF 204
               +GP++GP LGG+L +   W W+F IN+PVG+         +P       + D+ GF
Sbjct: 141 LPGQIGPLMGPTLGGFLVQYASWHWIFLINIPVGLVGALVTWWLMPNFTMPPRRFDLRGF 200

Query: 205 VTLSLAIGMLQLFLDRGEQLDWFDSWEIKLEAAAALVAFGFFVVHTWTVQG----VSFFD 260
           V L +A+G L L LD  + L       +   A  ALV  G   +  + +       S F+
Sbjct: 201 VCLVIAMGTLTLALDGQKSLG------LSAPALGALVLTGLLALLGYWLHARNNEQSLFN 254

Query: 261 RDLLKDRNFVTGLLFAFIV----GMILFATMALLPNFLQGLMGYPVVYTGQVTAPRGVGT 316
             L   R+F  GL   ++     GM+ F T    P FLQ  +GY   + G +  P  +G 
Sbjct: 255 LRLFNTRSFTIGLFGGWLARTGSGMLPFMT----PLFLQIGLGYTPFHAGMMMIPLVLGN 310

Query: 317 M----IAMIIVGRL-VQKVDVRAIMAVGFGLTAFSLYQMTRLTLQMDSTLIIVSGFIQGL 371
           M    + +IIV RL  + V + + + +      F+L  M          L++V     G+
Sbjct: 311 MGMKRLVVIIVNRLGYRAVLIASTLTLALATLLFALVAMMNWYWMTPVVLLLV-----GM 365

Query: 372 GIGFTFVPLSTATFATLAPRLRNQGTPIFSLLRNIGSSVGISIVQALL 419
             G  F  ++T T   L   L + G  + S+   + +S+G++I   LL
Sbjct: 366 VNGIRFSTMNTLTLKDLPDSLASGGNSLLSMSMQLSTSMGVTIAGLLL 413