Pairwise Alignments

Query, 505 a.a., GGDEF domain protein from Variovorax sp. SCN45

Subject, 522 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  332 bits (852), Expect = 2e-95
 Identities = 187/490 (38%), Positives = 277/490 (56%), Gaps = 8/490 (1%)

Query: 6   RLAKLLLLAVVVCVSAATCWQLWSARRHTLAEIDVNNLNLAQALNTYSEGIFTESAMLLL 65
           RL    +L V++       W++W   R      +    NLA+A   ++E    +   +  
Sbjct: 26  RLVLAFMLVVMLAFVLVEGWRIWRDYRFAYNNAENMVSNLARATAQHAEDAIRQVDAITG 85

Query: 66  GVAERLEAEGDGPAHLRRVQALVSRQEHLLNQLNGLSILDARGDWVMHSRGSFAPGTNSA 125
            +AERLE +G       R+ AL+++Q+ ++ QL+GL +    G W++  + +  P  N+A
Sbjct: 86  ALAERLEGDGFDHIDRPRLHALLAQQKRIMPQLHGLFVYGPDGSWIVTDQAAIPPKANNA 145

Query: 126 DRAYFIHHRDKRSQDIFIGSPVRSQFTGDWVITVSRRLEDGQGNFAGVIVVALGIENFLR 185
           DR YF +HR      + IGS VRS+ TGD +I +SRRLE   G+FAGV++  + +  F+R
Sbjct: 146 DRDYFAYHRSHNDPGVHIGSVVRSRSTGDLIIPISRRLEHADGSFAGVLLGTIKVAWFVR 205

Query: 186 AFGTIDLGGSGAISLATSGGQLLVRYPYREQDVGRDFSKSPNFLRRYA-GTSGTASFRSS 244
            +G   +   GA+ LA   G LLVR P+ EQ +GR  + S  F       T G A   + 
Sbjct: 206 YYGDFKIDERGALVLAKRDGTLLVRRPFVEQVIGRSLANSEIFRNHLPYATEGVAEAVAV 265

Query: 245 LDGVQRLYAFRTSERYPLVTTVSLGKDDALQAWRRQALLTLGVVGALLAVVAAVGRRLII 304
           +DG  RLY +R    YPLV    L ++  +  WR  A+ ++ V+  LL  +AA G  ++ 
Sbjct: 266 VDGTPRLYGYRALSSYPLVVEAGLSRESIVAPWRYDAIKSVAVLLLLLVGLAAFGGVVLR 325

Query: 305 NIQRRMSAEASLMAAREDLLQANRRLEVLATQDQLTGLANRRSFDDVLARECRRTAREGT 364
            ++ R+  E +L       LQA++ L+ LA  D LTGL NRR  D V   E RR  R+G 
Sbjct: 326 QLRERIVIERAL-------LQAHQTLKALALTDSLTGLGNRRRLDGVFEPELRRARRQGY 378

Query: 365 PLSLLLLDLDYFKHFNDTYGHVAGDRCLRAVADALQQGVRRPGDLVARYGGEEVAIILPN 424
           PL+L++LDLDYFK +ND YGH AGD+CLR  A+ LQQ ++RP DL  RYGGEE  ++LP+
Sbjct: 379 PLALVMLDLDYFKAYNDHYGHPAGDQCLRRFAEVLQQALKRPADLAVRYGGEEFTLLLPD 438

Query: 425 TDLPGALSVAEQLLERVRALGIAHAASPHERVTLSIGAASLHGMQANRAEQRLIEAADRA 484
           TD  GA  + ++L + +R   + HAASP  RV+ S G A +   +     + L+ AAD A
Sbjct: 439 TDGRGAELLVQELQQLLRRQALEHAASPLGRVSFSAGIAVVDLAREGGTIEALVAAADGA 498

Query: 485 LYRAKESGRN 494
           LY+AK+ GR+
Sbjct: 499 LYQAKQQGRD 508