Pairwise Alignments

Query, 273 a.a., Permease of the drug/metabolite transporter (DMT) superfamily from Variovorax sp. SCN45

Subject, 290 a.a., conserved membrane protein of unknown function from Pseudomonas putida KT2440

 Score =  231 bits (590), Expect = 1e-65
 Identities = 130/269 (48%), Positives = 176/269 (65%), Gaps = 5/269 (1%)

Query: 1   MLAFAANSLLCRLALQHKGIDAASFGSIRLVAGALMLGLIVRLRARPLASPARADWLAAV 60
           ++AFAANS+ CRLAL+   ID  SF ++RL +GAL L L++RLR+ P+ +     W   +
Sbjct: 24  LVAFAANSVFCRLALKDGAIDPVSFTAVRLASGALFLLLLIRLRS-PVHTMG-GSWWGGL 81

Query: 61  MLFGYVAFFSFAYLSLSAGTGALILFGAVQLTMFGVGLRSGGERFGLLAWLGFVLAVGGL 120
            LF Y   FS AYL L AG GAL+LFGAVQ+TMFG     G E   +   LG ++A  GL
Sbjct: 82  ALFLYAFLFSAAYLQLGAGVGALLLFGAVQITMFGFAWYRG-EHITVRMLLGMLIAFTGL 140

Query: 121 VYLVSPGIAAPPLLGAVSMAVAGVAWGVYSLRGRGVADPLAATARNFVRAVPLALGL--S 178
           + L+ PG++APPL  A+ MA++GVAWGVY+L G+G   PLA T  NF R++P  + L   
Sbjct: 141 LVLLLPGVSAPPLASALLMALSGVAWGVYTLLGKGSPRPLADTVGNFARSLPCLVLLLPM 200

Query: 179 LIFAASARVDATGLVLAVVSGALTSGLGYAVWYAALGGLTAMRAATVQLSVPLLAAFGGV 238
           L+  A   +   GL+ A+ SG L SG GYAVWY  +  ++A +AAT+QLSVPL+AA GGV
Sbjct: 201 LLLGAGPHLTPLGLLYALGSGVLASGAGYAVWYGVVRQISAQQAATLQLSVPLIAALGGV 260

Query: 239 LFLSESITPRLAAASVAILGGIALVLSQK 267
             + E ++ RL  A V +LGGIAL L+ +
Sbjct: 261 ALIGEPVSLRLLIACVVVLGGIALALAPR 289