Pairwise Alignments

Query, 598 a.a., Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Xanthobacter sp. DMC5

 Score =  430 bits (1106), Expect = e-125
 Identities = 262/604 (43%), Positives = 348/604 (57%), Gaps = 19/604 (3%)

Query: 3   TYNPPVRDMQFVLHEVLNVTEELKALPAHAETDA--DTINAVIEEAGKFAAEVTFPLNIS 60
           +Y  PV ++ + L      +  L  L A    D   D ++AV++EAGKFA  V  P +  
Sbjct: 2   SYRAPVEEVSYFL----KTSTSLPNLMAQGLVDLSFDVVDAVLDEAGKFAGSVIAPFDRV 57

Query: 61  GDEEGCTLDKATHEVKTPKGFKDAYAKYVEGGWPALSCDPAFGGQGLPFVVNQCLFEMLN 120
            D++GCTL      V TP+G + AY  + E GW  ++ +  FGGQ LP  V   L E  N
Sbjct: 58  ADKQGCTLKDGA--VTTPEGMRAAYEAWSEAGWSGVAAEEEFGGQNLPTSVTSALTEFWN 115

Query: 121 SANQAWTMYPGLSHGAYEALAAHGTEEQKKTYLPKLTSGEWTGTMCLTEPHCGTDLGLLR 180
           +A+ A+ +   L+ GA EAL AHG+ E +  +LPKL SG WTGTM LTEP  G+DL  LR
Sbjct: 116 AASPAFGICGVLTLGAIEALTAHGSAELQHIFLPKLVSGTWTGTMNLTEPQAGSDLAALR 175

Query: 181 TKAEPQADGTYRITGSKIFISAGEHDMTDNIIHLVLARLPDAPKGSKGISLFVVPKFKVK 240
           +KA  QADGTYRI G+KIFI+ GEHD+ +NI+HLVLARLPDAP G+KGISLFVVPKF V 
Sbjct: 176 SKAVKQADGTYRIFGTKIFITYGEHDIAENIVHLVLARLPDAPAGTKGISLFVVPKFLVN 235

Query: 241 ADGSLGERNPIFCAGLEHKMGIHGNATAQIVI----EGATGTLVGEPNKGLAAMFVMMNA 296
           ADGSLG RN   CAG+EHK+G+HG+ T  +      EGA G LVGE N+GLA MF MMN 
Sbjct: 236 ADGSLGARNDAVCAGIEHKLGLHGSPTCTMTFGEKGEGAIGYLVGEENRGLACMFTMMNN 295

Query: 297 ARLGVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVRKMLLTAK 356
           ARL VG Q + + E A Q A A+A+DR Q ++  GV+     + PII HPDV++MLLT +
Sbjct: 296 ARLAVGVQGVAVAERATQRAFAFARDRKQGKA-PGVEG----SAPIIAHPDVKRMLLTMR 350

Query: 357 AYAEGGRALQIFCTLLLDKEHNHPDEKVRKDSGELVALLTPIVKAFITDNGHISTNACMQ 416
           A  +  RAL +     LD+    PD   R  +    +LLTP+ KAF +D G   ++  +Q
Sbjct: 351 AETDAARALCLKTADALDRSRLLPDPIARAAALAEASLLTPVAKAFSSDAGIEVSSLGIQ 410

Query: 417 VFGGHGFIKEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKFGKLVGKL 476
           V GG G+++E G  Q +RD RI  IYEGTN IQ++DL+ RK+    G  +        + 
Sbjct: 411 VHGGMGYVEETGAAQHLRDARIFAIYEGTNGIQAIDLVTRKLPQEGGDVVNALIADYRET 470

Query: 477 VEE-EGVNEKMAEFINP-IAGLGDQLTKFTTEIGFKGFQNPDEVGAAAVDYLRVAGHFVF 534
            EE   +N        P +A   D L + T  +  +    P +  A A  YLR+      
Sbjct: 471 AEEVSALNAPDFGHAGPRLAEAVDALGRATRVMLDRVADEPAKALATATPYLRLYARAAG 530

Query: 535 GYLFARMAQVALREIAAGNNDPFYVAKLQTARFYFAKLFPETATLMRTARAGSKVLMDTD 594
           G   AR A  A  E AAG  DP   A++  ARF+   L  E   L      G+  +++ +
Sbjct: 531 GAFLARTALAAYAERAAGATDPRLAARITVARFFAENLAVEAKGLEEVVNGGAGGVLEAE 590

Query: 595 AALA 598
           A LA
Sbjct: 591 AVLA 594