Pairwise Alignments

Query, 598 a.a., Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) from Variovorax sp. SCN45

Subject, 584 a.a., putative Acyl-CoA dehydrogenase, ferrulic acid biotransformation protein from Pseudomonas putida KT2440

 Score =  443 bits (1140), Expect = e-129
 Identities = 257/581 (44%), Positives = 349/581 (60%), Gaps = 28/581 (4%)

Query: 3   TYNPPVRDMQFVLHEVLNVTEELKALPAHAETDADTINAVIEEAGKFAAEVTFPLNISGD 62
           T+  P+RDMQFVL   L   +    LPA+A+ D D    V+EEA +F  +V  PLN SGD
Sbjct: 2   TWKAPLRDMQFVLQHWLRADQAWAQLPAYADVDLDLAAQVLEEAARFCEQVLAPLNSSGD 61

Query: 63  EEGCTLDKATHEVKTPKGFKDAYAKYVEGGWPALSCDPAFGGQGLPFVVNQCLFEMLNSA 122
            +GC ++    EV+TP GF  AY  YV+GGWP+L+C PA GGQGLP V+   L EML  +
Sbjct: 62  RQGCQMEGG--EVRTPDGFPAAYRAYVDGGWPSLACAPALGGQGLPLVLEAALQEMLFGS 119

Query: 123 NQAWTMYPGLSHGAYEALAAHGTEEQKKTYLPKLTSGEWTGTMCLTEPHCGTDLGLLRTK 182
           N  W MY G++HGAY  L AH + E +  YLP + SG    TMCLTEP  G+DL LLR +
Sbjct: 120 NHGWAMYTGIAHGAYLCLKAHASAELQARYLPGIVSGATLPTMCLTEPQAGSDLSLLRCR 179

Query: 183 AEPQADGT---YRITGSKIFISAGEHDMTDNIIHLVLARLPDAPKGSKGISLFVVPKFKV 239
           A P  DG    Y ++G+K+FIS GEHD+T +I+HLVLARLPDAP G++G+SL +VPK+  
Sbjct: 180 AVPLGDGGDGGYAVSGNKLFISGGEHDLTRDILHLVLARLPDAPPGNRGLSLLLVPKWLE 239

Query: 240 KADGSLGERNPIFCAGLEHKMGIHGNATAQIVIEGATGTLVGEPNKGLAAMFVMMNAARL 299
                 G+RN ++C GLEHK+GI G+AT  + +EGA G L+G+P+ GLAAMFVMMN+ARL
Sbjct: 240 D-----GQRNTLYCDGLEHKLGIRGSATCALRLEGARGWLIGQPHGGLAAMFVMMNSARL 294

Query: 300 GVGNQSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVRKMLLTAKAYA 359
            VG Q LG  E A+Q A  YA +R QM +    K   + ADPI +HP +R++LL  +   
Sbjct: 295 HVGLQGLGHAEAAWQQARDYALERRQMSAPGRAKGGAQGADPIHLHPAMRRVLLELRVRT 354

Query: 360 EGGRALQIFCTLLLDKEHNHPDEKVRKDSGELVALLTPIVKAFITDNGHISTNACMQVFG 419
           EG RAL  +    LD      +   R  +  L ALLTPIVKA  T+ G    +  +QV G
Sbjct: 355 EGMRALAYWTAQWLDIADAAVEPAQRAKAATLAALLTPIVKAAFTEQGFSLASKALQVLG 414

Query: 420 GHGFIKEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKFGKLVGKLVEE 479
           G+G+ +E+ +EQ +RD+RI MIYEGTN IQ+ DL+ RKVLG+ G   + F  L+ +L  E
Sbjct: 415 GYGYTQEFAIEQTLRDSRIAMIYEGTNEIQANDLMLRKVLGDGG---EGFALLLSELRTE 471

Query: 480 EGVNEKMAEFINPIAGLG---DQLTKFTTEIGFKGFQNPDEVGAAAVDYLRVAGHFVFGY 536
              +   A      A LG   D L     ++      +P+    AA D+L++    +  +
Sbjct: 472 AAADAGAA-----AAALGSACDTLEAALAKVLSMTAGDPEFPYRAAGDFLQLCATVLQAF 526

Query: 537 LFARMAQV--ALREIAAGNNDPFYVAKLQTARFYFAKLFPE 575
            +AR A+   AL   AA   +     K ++  F+   L P+
Sbjct: 527 AWARSARCIQALPVGAAQRRE-----KQESVGFFLGYLLPD 562